Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1040 ATGAACAGTAAGCCTCAGCCTCAGCAACCCCAGAAATGTCCTCGGTGCGATTCTCTTAACACCAAGTTCTGCTACTACAACAACTATAGCCTCTCGCAGCCTCGTTACTTTTGCAAGGCGTGTCGAAGGTACTGGACTCAAGGCGGAACCTTGAGGAACGTCCGCGTCGGTGGTGGCTGCCGCAAGCCCAAGCGCACCAAAGCCTCGGCTTCTTCCTCGTCTTCCACCGATACCGGTTCTGCCCCGTCGTCGCAGCTGCCGCGAGAGACGGAGGTTCAAAAAGACCCTTATGCCGTGAGTTCTGCTGCTCCTCCTGCTACGGAGGCGGCGGCTTCATCAATCGGCCCCTTTTATCAAGGCGGTGCATGTGGTGATGATGGTGGGTATTTGTCTTCTCTGGCGTCGATTCGATCCTTGAATCCGTCGCAGCCCTTCAATCAGTTGGGGTCTTGTTCTAATCTGAGTCTTCTTTCTGGGTTCGGTGTTCCTTCTCTGGGCTCATCAGTTCGTCCATCGCAACCATTTTATCAGATGGGTGTTCTAAGAGAAAAGGAGGAAGATTCCCTGTATGAAGCAGACCAAGTTTTAATTCAATCAACCACGGTCAACAGCGGTTCTGCTTCTTCTCACCATGATTGGACTGAAAGCTTCATCAATAATAACGTTAACCAGAGGGGATCCGATGCCTCTCTGTGGAGCACCACCATGAGCACCGCTTCCGCTAGTGGAAATTCTCAGAGTCATAATGATGCAGTTGGCGGGTCATTTTCTTTGATCCCAAATCACCAGTGGCCTGATCTTCCCGAGTACGACCCTCCTCCATGA 825 0.5188 MNSKPQPQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKACRRYWTQGGTLRNVRVGGGCRKPKRTKASASSSSSTDTGSAPSSQLPRETEVQKDPYAVSSAAPPATEAAASSIGPFYQGGACGDDGGYLSSLASIRSLNPSQPFNQLGSCSNLSLLSGFGVPSLGSSVRPSQPFYQMGVLREKEEDSLYEADQVLIQSTTVNSGSASSHHDWTESFINNNVNQRGSDASLWSTTMSTASASGNSQSHNDAVGGSFSLIPNHQWPDLPEYDPPP 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1040 274 MobiDBLite consensus disorder prediction 66 90 - -
Prci3g1040 274 MobiDBLite consensus disorder prediction 56 94 - -
Prci3g1040 274 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 3 216 IPR045174 GO:0003700|GO:0006355
Prci3g1040 274 Pfam Dof domain, zinc finger 9 65 IPR003851 GO:0003677|GO:0006355
Prci3g1040 274 ProSiteProfiles Zinc finger Dof-type profile. 11 65 IPR003851 GO:0003677|GO:0006355
Prci3g1040 274 ProSitePatterns Zinc finger Dof-type signature. 13 49 IPR003851 GO:0003677|GO:0006355
Prci3g1040 274 MobiDBLite consensus disorder prediction 237 274 - -
Prci3g1040 274 MobiDBLite consensus disorder prediction 237 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1040 Prci-Chr3 13334056 13336206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1040 3 76 C2C2-Dof Transcription Factor Family AT5G60200 70.667 1.07e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci3g1040 zf-Dof 2.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1040 - - pcin:129305063 524.628