Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2019 ATGAAGAGAGATTATCCAGATACCAGTGGTGTTGGTGGTTGTGGTTTGAAAACTGAATGCTCATCAATGTCTAGTGGGAAGATGAAGATGTGGGAGGAAGAACTTGATGCTTCCAGCGGGATGGACGAGTTGCTGGCGGCTTTGGGCTACAAGGTTCGGTCGTCGGACATGGCGGATGTGGCCCAGAAGCTCGAACAGCTTGAGATGGTTATGGCCACTTCTCAGGAAGATGGGATTTCTCATCTTGCTTCTGACACCGTCCACTATGACCCCACCGATCTCCATGGTTGGGTTCAAAGCATGCTCACCGAGCTCCACGGTTCGCCTAATTGTCTCGATCCGTCGGCGCTGTTGGCGAACCACCAAGTTGACGACCCTATTCTGGCTCCGGCCGGATCCTCCGTCATATCTACCGGAAATTTCTCCAATTCGCAGCAGCGGATTGAGAATCTGTCGCACGTCTACCACGATGATTCCGAGTACGACCTCCGAGCAATTCCAGGCAAGGCGGCGTACCCACAAGGCAAAACGACAAATGGTGAAAATAACAAGCGATTGAAAACTTCACCTTCAACCGAATCCTCTCCGTTAACGTCGCCGGCGAGTGTCTCAGAGCAAGCGCGTCCGGTGGTTCTCGTTGACTCCCAGGAAAACGGGGTGCGTCTGGTGCACGCGCTGATGGCATGTGCGGAGGCGGTTCAGCAGAACAATTTGAAGCTTGCGGATGCACTTGTGGAGCACGTGGGCAGGCTAGCGGTGTCCCAAGCCGGGGCAATGGGGAAGGTGGCTACATACTTCGCCGAAGCTTTGGCTCTCCGAATTTATGGTGTCTCGCAACCACCAGTCGATTCCTCCTTCTCCGATATGCAATATTTGCATTTCTATGAGTCCTGCCCCTACCTGAAATTCGCCCATTTCACGGCTAACCAGGCCATTCTTGAAGCGTTCGCCACCGCTGACAGAGTTCACGTCATCGATTTTGGGCTCAAGCAGGGGATGCAATGGCCGGCATTAATGCAAGCCCTCGCATTACGACCTGGCGGTCCTCCGGCGTTCCGCCTCACCGGAATCGGACCTCCTCAGCCCGACAACACCGATGCTCTTCAACAAGTAGGATTGAAACTAGCTCAAATGGCGAAAACAATCAGAGTCCAGTTCGAATTCCGCGGGTTCGTCTGCAACAGCTTGGTGGATCTCGAACCGTCTCTCATCGAGATCCGACCCGGAGAAGCAGTCGCGGTGAACTCCGTTTTCGAGCTCCACGAACTCCTGGCCCGACGCGGCGCCATCGACAAGGTCTTGAGCACAATCAAGGCCGTCAATCCGAAGATCGTGACTGTGGTGGAGCAAGAAGCAAACCACAACGAGCCGGTTTTCCTGGCCCGTTTCACAGAAGCACTACACTACTACTCAACCATGTTCGACTCACTGGAGGGCTCATCATCGTCGTCGGGGTTAACGGCAGCGGCAAGTCAGGAAGTGCTGATGTCGGAGCTGTATCTAGGCAGACAGATATGCAACGTGGTGGCGTGCGAAGGGTCAGAGCGCATAGAGAGGCACGAGACACTGAGTCAGTGGAGGACTCGGATGGGACCGGCCGGGTTCGAACCGGTTCACCTGGGTTCGAACGCGTTCAAGCAAGCCAGCACGTTACTGGCACTGTTCGCCGGAGGAGACGGGTACAGGGTGGAAGAGAACAATGGGTGCCTTCTGCTAGGGTGGCACACTCGGCCCCTCATAGCAACGTCGGCTTGGAAAATTCCGGCGGGCGAGGTTTAG 1779 0.552 MKRDYPDTSGVGGCGLKTECSSMSSGKMKMWEEELDASSGMDELLAALGYKVRSSDMADVAQKLEQLEMVMATSQEDGISHLASDTVHYDPTDLHGWVQSMLTELHGSPNCLDPSALLANHQVDDPILAPAGSSVISTGNFSNSQQRIENLSHVYHDDSEYDLRAIPGKAAYPQGKTTNGENNKRLKTSPSTESSPLTSPASVSEQARPVVLVDSQENGVRLVHALMACAEAVQQNNLKLADALVEHVGRLAVSQAGAMGKVATYFAEALALRIYGVSQPPVDSSFSDMQYLHFYESCPYLKFAHFTANQAILEAFATADRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGLKLAQMAKTIRVQFEFRGFVCNSLVDLEPSLIEIRPGEAVAVNSVFELHELLARRGAIDKVLSTIKAVNPKIVTVVEQEANHNEPVFLARFTEALHYYSTMFDSLEGSSSSSGLTAAASQEVLMSELYLGRQICNVVACEGSERIERHETLSQWRTRMGPAGFEPVHLGSNAFKQASTLLALFAGGDGYRVEENNGCLLLGWHTRPLIATSAWKIPAGEV 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2019 592 MobiDBLite consensus disorder prediction 170 205 - -
Prci2g2019 592 Gene3D - 40 105 IPR038088 -
Prci2g2019 592 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 182 582 IPR005202 -
Prci2g2019 592 FunFam DELLA protein GAI 40 105 - -
Prci2g2019 592 SMART DELLA_2 42 115 - -
Prci2g2019 592 Coils Coil 57 77 - -
Prci2g2019 592 MobiDBLite consensus disorder prediction 175 205 - -
Prci2g2019 592 Pfam Transcriptional regulator DELLA protein N terminal 42 108 IPR021914 -
Prci2g2019 592 ProSiteProfiles GRAS family profile. 213 586 IPR005202 -
Prci2g2019 592 Pfam GRAS domain family 222 586 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2019 Prci-Chr2 15344528 15346790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2019 1 587 GRAS Transcription Factor Family AT2G01570 57.120 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci2g2019 GRAS 4.9e-137 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g2019 2 15344528 15346790 Prci2g2019 2 15344528 15346790 CCT
Prci2g2019 2 15344528 15346790 Prci2g2019 2 15344528 15346790 ECH
Prci2g2019 2 15344528 15346790 Prci6g0245 6 1419425 1423016 ECH