Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1559 ATGATGTTGTTTCAGCAGCAGCCACTAAATTCAAATTCTTGTTGCTCTCTTTTAAGATCTTTCGCTCATTTTTTTCCTCTGTTATTGAAAGGGAATATTGGAGTGGTTAAGCCTATGGAATTAGGTTCAACTCCAAAGCCTCCTATGTTGGAGAAAAAGGCAAGGCCTCAGAAAGATCAAGCTTTGAACTGTCCAAGGTGCAATTCAACCAACACCAAATTCTGCTACTACAACAACTATAGCCTCTCTCAACCCAGATACTTCTGCAAGACTTGTAGAAGGTATTGGACTGAAGGTGGCTCTCTCAGGAATGTTCCTGTGGGTGGAGGTTCCAGAAAAAACAAGAGACCTTCTTCTTCTTCCTCTGCTTCCTCAACATCAACAGCATCCAAGAAGCTTCCAGAACCTTCCCCTCAGAACCCCAGCAACAAGATCCACCAGGCCCAGGATCTTAACTTGGCTTACCCAACACCACCATCACTGCCTCCTCCACAACCTGACATTTCTGGCACTTCTAATTCTTCGAGGGGTTTGATGAATTCCTTGATGCCCATGTCGGTTTCATCAGATGGAAGCATGATGTATAACAGTAATAGTAATTCAGCTCATCATCATGGGTTTCCTTTCGAGTTCAAGCCCCATCATCATCAAGGGCTTAATTTTAGCTTCGAGGGGTTTGAGAATAATGGGTTTGGAAGTGGTCTTCATCATCATCAGGGAATGCAATTGGGTAATTCTGCTGGTGGTGCAAGGATCTTGTTTCCTATTGAAGATTTGAAGCACGTGCCAAGCACTGCAACCAGTCATGAGTTTGATCAGCAAAATAATAGAGCTGGAAGCCATGGAGATCCAAGTGGGTTTTGGAATGGCATGTTAGGTGGAGGAGCGTGGTAG 894 0.4418 MMLFQQQPLNSNSCCSLLRSFAHFFPLLLKGNIGVVKPMELGSTPKPPMLEKKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPSSSSSASSTSTASKKLPEPSPQNPSNKIHQAQDLNLAYPTPPSLPPPQPDISGTSNSSRGLMNSLMPMSVSSDGSMMYNSNSNSAHHHGFPFEFKPHHHQGLNFSFEGFENNGFGSGLHHHQGMQLGNSAGGARILFPIEDLKHVPSTATSHEFDQQNNRAGSHGDPSGFWNGMLGGGAW 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1559 297 MobiDBLite consensus disorder prediction 272 297 - -
Prci2g1559 297 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 51 221 IPR045174 GO:0003700|GO:0006355
Prci2g1559 297 MobiDBLite consensus disorder prediction 167 185 - -
Prci2g1559 297 ProSiteProfiles Zinc finger Dof-type profile. 62 116 IPR003851 GO:0003677|GO:0006355
Prci2g1559 297 ProSitePatterns Zinc finger Dof-type signature. 64 100 IPR003851 GO:0003677|GO:0006355
Prci2g1559 297 MobiDBLite consensus disorder prediction 103 185 - -
Prci2g1559 297 MobiDBLite consensus disorder prediction 113 154 - -
Prci2g1559 297 Pfam Dof domain, zinc finger 59 116 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1559 Prci-Chr2 11593694 11595930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1559 51 297 C2C2-Dof Transcription Factor Family AT4G24060 40.667 7.59e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci2g1559 zf-Dof 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1559 - - pcin:129300981 595.119