Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1417 ATGTCTGCAAGGAGTGAACACCACACCGTCCCCCTTTCGGTGCTTCTGAAGCGGGAATTGGCAAGCGAGAAAATTGAGAAACCAGAAATTATGCATGGTCAAGCCAGCCAGAGCAAAAAAGGCGAAGATTTCACTCTAATAAAGATGGAATGTCAAAGGGTGGTGGGAGACGGGGTGTCTACTTATTCTGTTTTTGGGCTATTTGATGGACACAATGGATCTGCTGCTGCAATTTATGCCAAGGAGAATCTCTTGAATAATGTTTTAAGCGCGGTTCCCCCAGATCTTAACAGAGAGGAGTGGGTGTCAGCATTGCCTAGGGCTTTGGTCTCTGGCTTTGTCAAAACTGATAAAGATTTTCAAGAGAAAGGACAAAAATCAGGAACAACAGCAACCTTTGTGATTATTGAAGGATGGGTTGTTACAGTTGCATCAGTTGGTGATTCCCGTTGCATCCTTGAGCCTTCTGAAGGTGGGATATATTACTTGTCAGCAGATCATAGGCTAGAAACTAACGAAGAGGAGAGGGAGCGTATAACTGCTAGCGGGGGTGAGGTTGGTCGTCTAAATACTGGTGGAGGCGCACAGGTTGGTCCTTTGAGGTGCTGGCCTGGCGGCTTGTGTCTTTCAAGATCCATCGGTGATATGGATATTGGTGAATATATTGTCCCTGTACCTTATGTGAAGCAAGTGAAGCTGTCCACGGCTGGAGGCAGGCTCATCATCTGCAGTGATGGTGTTTGGGATGCTTTGACTGCAGAAGCAGCCCTTGATTGTTGTCGTGGCATGGCAGCAGATGTTGCAGCATCCCTTCTTGTTAGAGAAGCTTTACAAGCAAAGGGACTTAGAGATGATACTACCTGCGTTGTTGTTGATATATTACCTCAGGAGAAGCCACCTGCTCCTGTGCAACAACCAAAAAAGGCAGGAAAAATGTTTAAGGCCATGTTTCGCAAAAAGTCCTCTGAATCATCTTCTTGTAATGACAAAGAGTACATGGAACCAGATATGGTAGAGGAACTGTACGAGGAAGGATCTGCTATGCTTTCAGACAGGTTAGACACAAAATACCCACTCTGCAACATGTTCAAGTTGTTTGTTTGTGCGGTATGTCAAAGGGAGATCAAACCTGGAGAGGGTATTTCAATCCATGCAGGTGTATCCAACCCAGGAAAATTGCGTCCCTGGGACGGACCTTTTCTTTGTTCAAGTTGTCAGGAGAAGAAAGAAGCAATGGAAGGGAAAAAAACATCAGATAGGCTGAGCAGTGGAAGTGACTGA 1281 0.4559 MSARSEHHTVPLSVLLKRELASEKIEKPEIMHGQASQSKKGEDFTLIKMECQRVVGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLSAVPPDLNREEWVSALPRALVSGFVKTDKDFQEKGQKSGTTATFVIIEGWVVTVASVGDSRCILEPSEGGIYYLSADHRLETNEEERERITASGGEVGRLNTGGGAQVGPLRCWPGGLCLSRSIGDMDIGEYIVPVPYVKQVKLSTAGGRLIICSDGVWDALTAEAALDCCRGMAADVAASLLVREALQAKGLRDDTTCVVVDILPQEKPPAPVQQPKKAGKMFKAMFRKKSSESSSCNDKEYMEPDMVEELYEEGSAMLSDRLDTKYPLCNMFKLFVCAVCQREIKPGEGISIHAGVSNPGKLRPWDGPFLCSSCQEKKEAMEGKKTSDRLSSGSD 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1417 426 SMART PP2C_4 21 291 IPR001932 -
Prci2g1417 426 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
Prci2g1417 426 PANTHER PROTEIN PHOSPHATASE 27 292 IPR015655 GO:0004722|GO:0006470
Prci2g1417 426 Pfam Protein phosphatase 2C 52 277 IPR001932 -
Prci2g1417 426 SUPERFAMILY PP2C-like 37 293 IPR036457 -
Prci2g1417 426 SMART PP2C_SIG_2 54 293 IPR001932 -
Prci2g1417 426 CDD PP2Cc 39 293 IPR001932 -
Prci2g1417 426 Gene3D - 31 299 IPR036457 -
Prci2g1417 426 FunFam probable protein phosphatase 2C 12 32 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1417 Prci-Chr2 10647866 10653256 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1417 1 426 PP2C-type Phosphatase Gene Family AT1G47380 77.570 0.0 707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1417 2 10647866 10653256 Prci8g0282 8 1781133 1786368 CCT
Prci2g1417 2 10647866 10653256 Prci2g1417 2 10647866 10653256 ECH