Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1378 ATGTCGGCAGTGTGCACTGTTCCCCCACCTTATGTCTTTCTTATAAGCCAACCAAATGAAGAACCACTAGGGACATTCGACACTTGGCGCCTCTCCCCGTTAGCACACCATCCCTGCTCGCTTTTGTTTTTCTCTCCAAATTTAGAACTTATACTAAGATTTTACCAAACTGGGACCAAAATGAACTTCGGTAATGAGCATGGAGGCGGAAACGCCGGCGGCGGAAGGCCTCTGGCAAATTTTCCGCTGGCACGACAACCGTCAGTCTACTCCCTGACATTCGATGAGTTTGTGAGTACTATGGGAGGTTCTGGAAAGGACTTTGGGTCGATGAACATGGATGAGCTGCTTAAGAACATCTGGAGTGCTGAAGAGGTTCAAACAATGGCTTCCTTGAGTGGTGGTCAACTGGGTGGAAGTGCCTCTGGTGGGCATTTGCAGAGACAAGGCTCCTTGACGTTGCCGCGAACACTTAGCCAGAAAACCGTAGATGAGGTTTGGAAGGATATTTCCAAGGACAATGGTGCGGAGAAGGATGCTCCAAATATCCCACAGAGGCAGCAGACTTTGGGAGAGATAACGTTGGAAGAGTTCTTGGTGAGAGCAGGAGTTGTCAGAGAAGAAGCACAAGCACAATTGTTGGGAAAGCCAAATGGTATGGATTTCCCCGATTTATCTCGTACTGGAAATAATAATGGTGTAGGATTGGGTTTTCAGCAGATGAACAAGGGTTCAGACTTAATGACAAACCAAATTACCGGGAATAATGACCAGCTACCTCTTCAGTCTCGCGCCAATTTGCCATTGAATGTAAACGGTGCTAGATCGAATCAGCAACAGATGCCGAATTCAAAGTTACCACAGCCACAGATATTTCCAAAGCAGCCTGCCATGCCTTATGCTGGTCAGATGCCATTAACGAACAACGCTCAGCTAGGTAATCAAGGAATGAGAGGTGGAATGGCGGGTATTGTGGATCAGGGTCTGAATGGTAATCTGGTTCAGAGTTCAGCGCTGCAAAGTGGAGGGATGGGCATGATTGGTTTAGGACCTGGGGCTGTTCGTGTGGCTACAGGATCACCAGCTAATCAGCTGTCTTGTGACGAAATTGGAAAGAATAATGATGACACTTCGTCAGTGTCGCCACTTCCTTATGTGTTCAATGGTGGTTTAAGAGGGAGGAAAACCAGTGGGGCTGTAGAGAAGGTTATTGAGAGGAGACAGAGGAGAATGATCAAGAACAGAGAGTCTGCTGCTAGGTCCCGGGCTCGTAAGCAGGCCTATACCATGGAATTGGAGGCAGAAGTTGCAAAGTTAAAAGAGGAGAATGAAGAACTTAGGAGGAAGCAGGCAGAAATCATGGAAATGCAAGAGAATCAAGTAAAGGAGATGAGGAATTTGCAACAGGGAGTCAAGAAAAGGTGCTTAAGACGAACACAAACTGGACCATGGTAG 1455 0.4715 MSAVCTVPPPYVFLISQPNEEPLGTFDTWRLSPLAHHPCSLLFFSPNLELILRFYQTGTKMNFGNEHGGGNAGGGRPLANFPLARQPSVYSLTFDEFVSTMGGSGKDFGSMNMDELLKNIWSAEEVQTMASLSGGQLGGSASGGHLQRQGSLTLPRTLSQKTVDEVWKDISKDNGAEKDAPNIPQRQQTLGEITLEEFLVRAGVVREEAQAQLLGKPNGMDFPDLSRTGNNNGVGLGFQQMNKGSDLMTNQITGNNDQLPLQSRANLPLNVNGARSNQQQMPNSKLPQPQIFPKQPAMPYAGQMPLTNNAQLGNQGMRGGMAGIVDQGLNGNLVQSSALQSGGMGMIGLGPGAVRVATGSPANQLSCDEIGKNNDDTSSVSPLPYVFNGGLRGRKTSGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELRRKQAEIMEMQENQVKEMRNLQQGVKKRCLRRTQTGPW 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1378 484 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 409 424 IPR004827 GO:0003700|GO:0006355
Prci2g1378 484 Gene3D - 404 477 - -
Prci2g1378 484 Pfam bZIP transcription factor 406 459 IPR004827 GO:0003700|GO:0006355
Prci2g1378 484 CDD bZIP_plant_BZIP46 406 457 - -
Prci2g1378 484 SUPERFAMILY Leucine zipper domain 406 455 IPR046347 GO:0003700|GO:0006355
Prci2g1378 484 SMART brlzneu 402 466 IPR004827 GO:0003700|GO:0006355
Prci2g1378 484 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 83 484 IPR043452 GO:0003700|GO:0045893
Prci2g1378 484 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 404 467 IPR004827 GO:0003700|GO:0006355
Prci2g1378 484 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 404 461 - -
Prci2g1378 484 Coils Coil 422 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1378 Prci-Chr2 10475091 10479911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1378 58 484 bZIP Transcription Factor Family AT4G34000 44.609 1.19e-97 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci2g1378 bZIP_1 4.3e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1378 2 10475091 10479911 Prci2g1378 2 10475091 10479911 ECH