Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1371 ATGGCACTCCCTCAGCACCACCTCCAACAACACTACCAAACCCAACCACTACAACCACAATCAAAATCATTCAGAGCTTTACAAACAGTAGATGGCCAGATGTCGCAGCCGGTAGCCTTCTATAATCCAGCTGATTTGCAGGATCAGACCCAGCATGCTCCGTATGTTCCTCCTTTTCACGTTGTTGGGTTTGCTCCGGGTCCATTTCCTTCTGCTGACGGCAGTGATGGTGGAGCTGATTTGCAATGGAATTACGGGTTAGAACCCGAGAGGAAAAGGCTAAAAGAACAGGATTTTCTGGAGAACAATTCTCAGATATCTTCCATAGATTTCCTTCAAACTCGATCAGTCTCCACTGGATTGGGTTTGTCTCTTGACAATACCCGCATGGCTTCTACTGGAGACTCGGCTTTACTGTCACTCATTGGTGACGACGTTGAACGTGAATTACAGCAGCAGGACGCAGAAATACAAAAATATCTCAGAGTGCAGGGTGAACGTTTGCGCCAAACAATTATGGAGAAGGTTCAAGCAACTCAGCTTCAGAGTATATCAATTGTTGAAGACAGAGTTCTACAGAAACTTAACGAGAAAGAAGCTGAGGTTGAAAGCATCAATAAGAGGAATATGGAACTTGAAGAGCGAATGGAGCAGTTGACTGTTGAAGCAAGTGCTTGGCAACAGCGAGCCAGATACAACGAGAACATGATTGCTGCTCTCAAGTACAATCTTCAGCAAGTATATGCTCAAGGCAGAGATAGCAAAGAAGGATGCGGCGACAGTGAGGTAGATGACACAGCTTCATGCTGCAATGGCCGTTCCATTGATTTTCACCTGCTCTCCAAGGACAACAATGATATGAAAGAGATGATGACTTGTAAGGTATGCAGAGTGAATGAAGTTAGCATGCTTTTATTACCATGCAAACACCTCTGCCTCTGCAAAGATTGTGAAAGCAAGCTTAGTTTCTGCCCCTTGTGTCATTCCTCAAAATTTATTGGCATGGAGGTTTATATGTAA 1020 0.4441 MALPQHHLQQHYQTQPLQPQSKSFRALQTVDGQMSQPVAFYNPADLQDQTQHAPYVPPFHVVGFAPGPFPSADGSDGGADLQWNYGLEPERKRLKEQDFLENNSQISSIDFLQTRSVSTGLGLSLDNTRMASTGDSALLSLIGDDVERELQQQDAEIQKYLRVQGERLRQTIMEKVQATQLQSISIVEDRVLQKLNEKEAEVESINKRNMELEERMEQLTVEASAWQQRARYNENMIAALKYNLQQVYAQGRDSKEGCGDSEVDDTASCCNGRSIDFHLLSKDNNDMKEMMTCKVCRVNEVSMLLLPCKHLCLCKDCESKLSFCPLCHSSKFIGMEVYM 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1371 339 MobiDBLite consensus disorder prediction 1 21 - -
Prci2g1371 339 Coils Coil 188 229 - -
Prci2g1371 339 PIRSF SBP1_RNase_bind 6 339 IPR017066 -
Prci2g1371 339 MobiDBLite consensus disorder prediction 7 21 - -
Prci2g1371 339 Pfam Zinc finger, C3HC4 type (RING finger) 291 329 - -
Prci2g1371 339 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 274 339 - -
Prci2g1371 339 CDD mRING-HC-C3HC5_CGRF1-like 292 327 - -
Prci2g1371 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 278 339 IPR013083 -
Prci2g1371 339 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 90 337 IPR017066 -
Prci2g1371 339 ProSiteProfiles Zinc finger RING-type profile. 293 328 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1371 Prci-Chr2 10373165 10376168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1371 293 329 Miscellaneous Gene Families AT2G21380 48.649 1.23e-07 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1371 2 10373165 10376168 Prci2g1371 2 10373165 10376168 ECH