Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1367 ATGGCCGATATGTACGGTACTCCTCCCTCCCTCCTCACCTCCGTCATGCCTTCTGATTCTGATGATTTCTCCACCTTCTTCACCCACCTTCTCGATAACTCGCCCTCCTCTTCCATCCTTACCAAACCCAAGACCTCGCCGCCGCCATGGCTCCCCGTGCCGGCGGGGACCGCCGGGTTTGGCCAATTGGGGTCGGACTCCCCTCACAAAAATGGCAAGTCTGTTGGTTCTTCGGATGCAGTCTCCGATTCTTTCGACTTTTCTGATCCCTATGCTTACGTTCCTACTGATGTGAAAGAGGCTAGTGGAAATGAGTTCTTTCCGACTGGTGTCGACGATTCTGATGAAAATACCTCCTTCAAAGAACACAGGATTTCGCCGGAGATTGATCCCGGCAATTTCGTTTGCGCTACCGAGAAGAATGCTGAGGCGTCGCAGACAAAGCGAGTTCCAGCACGTACTTCCTCAAAGAGGAGCAGAGCTGCAGAGGTTCATAATATGTCTGAAAAGAACTTAATTCCAAATTCTAACAAGACGGATAAAGCTTCAATGTTGGATGAGGCGATTGAATATTTGAAGCAGCTTCAACTTCAAGTGCAAATGTTAATGATGAGAAATGGTTTGAGCTTGCATCCAATGTGTTTACCAGGAGGACTGCAGTCTATGGCAACGGCACTGCCTCAGACAGGGTTGAATAATTTTGACGAGTCCAACGGATATCAGAATTCTTGCTGCGGAATTGCCTCGTCCGTAAATGCTGAATGCTTGGTGCACCCAGACTTCAGCCTTCCAAAGCATTGCTGCATCTCAGACCAGCCTTTGATCATGCCCTCGATGACAAACATGACCAACCCAGATAACTCATCTGGTTTCAAATTTCACACTGGACTGCTTGACCCTTCTACATCATCCAAGGATGCACTTTCTGATGGCGCACCACAGCTCCATTTGGATACCACAAACATTGAAAAGAGCGCGTCTTCAGATGTCTCTTGA 996 0.4839 MADMYGTPPSLLTSVMPSDSDDFSTFFTHLLDNSPSSSILTKPKTSPPPWLPVPAGTAGFGQLGSDSPHKNGKSVGSSDAVSDSFDFSDPYAYVPTDVKEASGNEFFPTGVDDSDENTSFKEHRISPEIDPGNFVCATEKNAEASQTKRVPARTSSKRSRAAEVHNMSEKNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLMMRNGLSLHPMCLPGGLQSMATALPQTGLNNFDESNGYQNSCCGIASSVNAECLVHPDFSLPKHCCISDQPLIMPSMTNMTNPDNSSGFKFHTGLLDPSTSSKDALSDGAPQLHLDTTNIEKSASSDVS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1367 331 SMART finulus 154 201 IPR011598 GO:0046983
Prci2g1367 331 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 18 296 IPR031066 -
Prci2g1367 331 MobiDBLite consensus disorder prediction 140 165 - -
Prci2g1367 331 MobiDBLite consensus disorder prediction 33 81 - -
Prci2g1367 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 206 IPR036638 GO:0046983
Prci2g1367 331 Pfam Helix-loop-helix DNA-binding domain 171 196 IPR011598 GO:0046983
Prci2g1367 331 CDD bHLH_AtPIF_like 160 208 IPR047265 -
Prci2g1367 331 MobiDBLite consensus disorder prediction 302 331 - -
Prci2g1367 331 MobiDBLite consensus disorder prediction 67 81 - -
Prci2g1367 331 Gene3D - 153 211 IPR036638 GO:0046983
Prci2g1367 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 146 195 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1367 Prci-Chr2 10338442 10341352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1367 160 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 72.222 5.06e-26 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1367 2 10338442 10341352 Prci2g1367 2 10338442 10341352 ECH