Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1361 ATGGAAGAAAGAGACTGTTGTTCGAGGGATTCGACGATCACGACGATCAGAAGCAGCCCAGAGAAGCGGAAGCAACAGAGACAGCACCAGAAAGCAGCGAAGGACAAGCCATACAGAGGGATAAGGATGAGGAAGTGGGGCAAGTGGGTGGCTGAGATCAGAGAACCCAACAAGAGGTCAAGGATTTGGCTGGGTTCCTACACCACTCCCATCGCCGCCGCACGCGCCTACGACACCGCCGTTTATTACCTCCGAGGCCCTTCTGCTTCGCTTAACTTCCCCGAACTCTTGTTCCAAGACAACAACGCTCTCTCTCGCGGCGACATGTCCGCCGATTCCATACGCAAGAAAGCCACCGAAGTCGGCGCCAGAGTTGACGCCCTTCAAACCGCCCTTCACTCCTCCTCTCCCTCCAGTTCTACCCAAACCACCTCTTGCAAACCCGACTTGAACGAGTACCCCCAACCCGAAGACTCCGTCTAG 483 0.559 MEERDCCSRDSTITTIRSSPEKRKQQRQHQKAAKDKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVYYLRGPSASLNFPELLFQDNNALSRGDMSADSIRKKATEVGARVDALQTALHSSSPSSSTQTTSCKPDLNEYPQPEDSV 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1361 160 CDD AP2 38 96 IPR001471 GO:0003700|GO:0006355
Prci2g1361 160 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Prci2g1361 160 MobiDBLite consensus disorder prediction 1 37 - -
Prci2g1361 160 Pfam AP2 domain 38 86 IPR001471 GO:0003700|GO:0006355
Prci2g1361 160 MobiDBLite consensus disorder prediction 130 160 - -
Prci2g1361 160 MobiDBLite consensus disorder prediction 130 150 - -
Prci2g1361 160 Gene3D AP2/ERF domain 37 95 IPR036955 GO:0003700|GO:0006355
Prci2g1361 160 FunFam Ethylene-responsive transcription factor 2 36 95 - -
Prci2g1361 160 PRINTS Ethylene responsive element binding protein signature 76 96 IPR001471 GO:0003700|GO:0006355
Prci2g1361 160 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Prci2g1361 160 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Prci2g1361 160 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 21 159 - -
Prci2g1361 160 SUPERFAMILY DNA-binding domain 37 95 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1361 Prci-Chr2 10274376 10275451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1361 18 143 AP2-EREBP Transcription Factor Family AT1G46768 64.394 1.36e-50 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci2g1361 AP2 1.7e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1361 2 10274376 10275451 Prci2g1361 2 10274376 10275451 ECH