Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1351 ATGGAAGCAGGGGAAGATTGTTGCGTCAAGGTTGCTGTCCATGTCCGACCGCTCATCAGTGATGAAAAGCTTCAGGGATGTAAAGACTGTGTCATTGTCGTCCCTGGGAAGCCTCAGGTGCAAATTGGTGCTCATTCCTTCACATTTGATCATGTTTACGGGAGTACTGGTTCTCCTTCATCCTCTATGTTTGAAGAATGTGTCGCTCCCCTTGTTGATGGTTTATTCCAAGGATATAATGCTACTGTTCTCGCATATGGTCAGACAGGTTCAGGGAAAACATACACCATGGGTACTGGTTTTAAAGATGGTTGCCAAACAGGCATAATACCCCAAGTCATGAATGTTTTGTTCAGCAAAATTGAGACTTTAAAGCATCAGATTGAATTTCAATTGCATGTTTCCTTCATTGAGATTCTTAAAGAAGAAGTACGAGACTTGTTGGATCCTTCTTCCATGAGCAAGCAAGAAGCTGCTAATGGACATGCAGGAAAAGTGACCGTCCCTGGGAAACCTCCCATACAAATTCGTGAGACATCAAATGGTGTTATTACACTAGCTGGATCTACTGAAGTTAGTGTTTCAACACTGAAAGAAATGGCTGCTTGGCTGGAACAAGGGTCATTGAGCAGAGCTACTGCGAGCACAAATATGAATAACCAATCCAGTCGTTCACATGCCATTTTCACCATCACATTAGAGCAAATGCATAAACCCAAGGCTGTTATGCCTGGCGAGAACGGTTTAAATGAGTCAATTAATGATGAGTATCTTTGTGCTAAGTTGCACCTCGTGGATCTTGCTGGCTCAGAACGAGCTAAAAGAACAGGCTCTGATGGTCTGCGTTTTAAGGAAGGAATTCATATTAACAAGGGCCTCCTGGCACTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCTTACAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTCGGTGGTAACAGCAGAACTGTTATGATAGCCTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTCAACACTTTGAAGTATGCAAATCGTGCACGCAATATTCAAAATAAACCTGTTGTCAACAGAGATCCCATGTCCAGCGAAATGCTGAAAATGAGACAACAGCTAGAGTATTTGCAAGCAGAACTTTGTGCTCGTGCTGGGGGCTCTTCTGAGGAAGTTCAGGTCCTCAAGGAAAGGATTGCTTGGCTTGAAGCTGCTAATGAGAATCTTTGCCGCGAACTTCACGAATACCGTAGCAGATGTTCTGTTGTAGAACAATGTGAAAAGGACGCTCTTGATGGTAGCCCATGCATTGTTAAGACTGATGGGCTCAAGAGGAGCTTTCCTATCATAGCATCTGATTATTCAGTGAATGAAACAACAGGTGATCCAAGAGAGATTGAAGAAGTGGCAAAAGAATGGGAGCACACACTTCTGCAAAATAGTATGGATAGAGAGTTGCACGAGTTAAATAAACGCTTGGAGCAGAAAGAGACTGAAATGAAGCTTTTTGGAGCATCTGATGCTGAAGTACTCAAGCATCACTTTGGAAGGAAAATAATGGAGTTGGAGGATGAGAAGAGAGCTGTCCAGCAAGAAAGGGATCGTCTATTAGCTGAGGTTGAAAATCTTTCTGCTAATTCTGATGGACAAACACAGAAATTAGAGGATGTCCATGCCCAAAAATTGAAATCACTTGAATCACAGATTCTGGATCTGAAGAAGAAACAAGAGAGCCAGGTTCAGCTTATGAAGCAGAAGCAAAAAAGTGATGAGGCAGCGAAGAGACTGCAAGACGAAATACAATCTATAAAAGCCCAGAAGGTTCAATTGCAACAAAGGATTAAACAAGAGGCAGAGCAATTTCGGCAGTGGAAGGCTTCTAGAGAAAAAGAACTCCTGCAATTACGAAAGGAAGGAAGGAAAAATGAGTATGAAAGACATAAGCTACAAGCTTTAAATCAGCGCCAGAAAATGGTCCTTCAAAGAAAGACTGAAGAAGCTGCCATGGCCACCAAGAGACTAAAGGAGTTGTTAGAAGCTCGGAAATCTTCCAGCCGAGATACTTCATCTATTATCAACGGAAGTGGAACAAATGGACAGAGCAATGAGAAGTCCTTACAACGGTGGCTTGATCATGAGCTAGAAGTCATGGTGAAAGAGCATGAAGTCCGTTTTGAGTATGAGAAGCAGAGCCAAGTGCGAGCTGCTCTTGCTGAAGAGTTAGCCATACTGAAGCAAGTGAATGAATTTGCTGCAAAGGGCCTCACTCCTCCAAGAGGAAAGAATGGTTTTGCTAGAGCATCCTCCATGTCACCAAATGCAAGAATGGCTAGAATAGCTTCGCTGGAGAACATGCTGAGCATATCATCTAATTCACTAGTGGCAATGGCTTCTCAACTTTCTGAAGCAGAAGAAAGAGAACGAGCTTTTACTAATCGCGGACGCTGGAACCAACTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTCAATTCTGTTGCAGATGCTAGATGCCAACTGTGGGAGAGAGATATGGAGATCAGGGAAATGAAAGAACAAATTAAAGAACTTGTAGGCCTATTACGGCAGAGTGAGATGAAGCGAAAGGAAACTGAGAAGGAGCTGAAATTGAGAGATCAAGCGCTTGCAACCACATTGGCTACACCAGCTTCTGGGAACTCACCAAATTCAGTGAAACACTACGTTGAAGATATGAATGGATCGTTATCTCCGGTGTCTGTGCCAGTACCAAAACAGCTCAAGTATACCCCAGGAGTCGTTAATGGCCTCGCAGGGGAATCCGCAGCATTTATAGATCAGAGTAGAAAGATGGTACCCATGAGGCAACTATCAATGAAAAAACTAGCATTTGTAGGACAAGCTTCAGGGAAGTTGTGGAGGTGGAAAAGAAGTCACCACCAATGGTTAGTACAATTCAAGTGGAAGTGGCAAAAGCCCTGGAGGCTTTCAGAATGGATTCGCCACAGTGATGAGACAATTATGAGAGCAAGGCCACGGCCACAGGCCTTGCCACGTCCCCTATGA 3093 0.4345 MEAGEDCCVKVAVHVRPLISDEKLQGCKDCVIVVPGKPQVQIGAHSFTFDHVYGSTGSPSSSMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIIPQVMNVLFSKIETLKHQIEFQLHVSFIEILKEEVRDLLDPSSMSKQEAANGHAGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSTLKEMAAWLEQGSLSRATASTNMNNQSSRSHAIFTITLEQMHKPKAVMPGENGLNESINDEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSSEMLKMRQQLEYLQAELCARAGGSSEEVQVLKERIAWLEAANENLCRELHEYRSRCSVVEQCEKDALDGSPCIVKTDGLKRSFPIIASDYSVNETTGDPREIEEVAKEWEHTLLQNSMDRELHELNKRLEQKETEMKLFGASDAEVLKHHFGRKIMELEDEKRAVQQERDRLLAEVENLSANSDGQTQKLEDVHAQKLKSLESQILDLKKKQESQVQLMKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLRKEGRKNEYERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSSRDTSSIINGSGTNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAILKQVNEFAAKGLTPPRGKNGFARASSMSPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWERDMEIREMKEQIKELVGLLRQSEMKRKETEKELKLRDQALATTLATPASGNSPNSVKHYVEDMNGSLSPVSVPVPKQLKYTPGVVNGLAGESAAFIDQSRKMVPMRQLSMKKLAFVGQASGKLWRWKRSHHQWLVQFKWKWQKPWRLSEWIRHSDETIMRARPRPQALPRPL 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1351 1030 ProSitePatterns Kinesin motor domain signature. 260 271 IPR019821 GO:0003777|GO:0005524|GO:0007018
Prci2g1351 1030 SMART kinesin_4 6 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g1351 1030 FunFam kinesin-like protein KIN-4A isoform X1 2 393 - -
Prci2g1351 1030 Coils Coil 673 693 - -
Prci2g1351 1030 Coils Coil 405 432 - -
Prci2g1351 1030 Coils Coil 863 890 - -
Prci2g1351 1030 CDD KISc_KIF4 7 366 - -
Prci2g1351 1030 MobiDBLite consensus disorder prediction 697 717 - -
Prci2g1351 1030 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 395 IPR027417 -
Prci2g1351 1030 Gene3D Kinesin motor domain 2 393 IPR036961 -
Prci2g1351 1030 MobiDBLite consensus disorder prediction 691 717 - -
Prci2g1351 1030 Coils Coil 492 512 - -
Prci2g1351 1030 Coils Coil 525 566 - -
Prci2g1351 1030 Coils Coil 592 640 - -
Prci2g1351 1030 ProSiteProfiles Kinesin motor domain profile. 8 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g1351 1030 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1021 IPR027640 GO:0003777|GO:0007018
Prci2g1351 1030 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g1351 1030 PRINTS Kinesin heavy chain signature 315 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g1351 1030 PRINTS Kinesin heavy chain signature 261 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g1351 1030 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g1351 1030 Pfam Kinesin motor domain 38 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1351 Prci-Chr2 10216535 10228370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1351 49 389 Calmodulin-binding Proteins AT5G65930 35.088 2.78e-52 198