Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0435 ATGCCGCACCAGAAGACCATTTTGCGAAGCTCCTTCCATCTGTTACTTTTGCAGGTCTTAATCAGAGTTGCTCTTGTGAGCTCCAAATCTACAATCGAGCCTTGCTCAAACTCCGACTCCTGTAATGCCCTTCTCGGCTACACTGTTTACACTGATCTAAAAGTCTCTGAGGTGGCTTCCCTCTTTCAAATTGACTCCATTGCTCTTCTCACCGCCAATGCCATCGACATTTCGTACCCTGACGTAGAACACCACATTCTGCCCTCCCAACTCTTCCTTAAAATCCCCATAACCTGTTCATGCGTTGATGGGATTCGTAAATCGGTATCGACCCATTACAGAACTCGGCCCTCTGATACTCTTTCATCGATTGCAGACACTATATTTGGGGGTCTGGTGTCTTCAGACCAGCTTAGGGAGGCGAACTCCATAGCCGACCCTTCAGTACTGGATGTGGGTCAGAACCTTGTGGTGCCTCTTCCATGCACTTGCTTCAATGGGACCGATAACTCTCTGCCTGCAATATACCTCTCGTACGTGGTGCAGCCCGTTGACACTCTGGCTGTGATTGCTGCCAGGTATTCCACCACTCTTACTGATTTGATGGATGTTAATGCGTTGGGAAGCACGGCTATCAGCGATGGCGATATTCTTGCTATTCCTATCCCGGCTTGCGCGTCAAATTTTCCGAGTTATGCGGCTGATTATGGTTTGCTTGTCCCCAATGGAAGCTATGCGGTTACAGCAGGCCACTGTATGCAGTGTAGTTGTGGACCACAAAATCTAAATTTGTACTGTATGCCTGCTTCTCTGGCCGTTTCTTGTTCTAGCATGCAATGTAAAAGCAGCAACCTTATGGTTGGGAATGTTACAACACAACAAAGCAGTGCTGGCTGCAATGTTACTTCTTGTAGTTATGATGGTTATGCTAATGGCACAATAATAACAGCGTTGTCTACTTCTCTTCAGCCTCGATGCCCAGGGCCACAGAAATTTCCCCCACTCGTAGCTCCACCTACTACTGTTACTAGGATTACAGAATTGGCACCAGCACCATCACCTCAGTCATATTCAGGTGGTCCGACAAACCCCAAATCATCAGTGGTGCCTTCGACTGGGTCAATTCCTGGATTCACCCGCGCAAATGGGCCAGCCGTTGGGCTACTGTCCGGTGCTTCTGCTGCAAGCTCCTTGTTGAATCCTATACCCACTTTGACACCTGCACTTGTGTTATTGTTTGTTAAGTTGTTGATCTCTTTAGCATGGTAA 1269 0.4783 MPHQKTILRSSFHLLLLQVLIRVALVSSKSTIEPCSNSDSCNALLGYTVYTDLKVSEVASLFQIDSIALLTANAIDISYPDVEHHILPSQLFLKIPITCSCVDGIRKSVSTHYRTRPSDTLSSIADTIFGGLVSSDQLREANSIADPSVLDVGQNLVVPLPCTCFNGTDNSLPAIYLSYVVQPVDTLAVIAARYSTTLTDLMDVNALGSTAISDGDILAIPIPACASNFPSYAADYGLLVPNGSYAVTAGHCMQCSCGPQNLNLYCMPASLAVSCSSMQCKSSNLMVGNVTTQQSSAGCNVTSCSYDGYANGTIITALSTSLQPRCPGPQKFPPLVAPPTTVTRITELAPAPSPQSYSGGPTNPKSSVVPSTGSIPGFTRANGPAVGLLSGASAASSLLNPIPTLTPALVLLFVKLLISLAW 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0435 422 Gene3D LysM domain 105 166 IPR036779 -
Prci2g0435 422 ProSiteProfiles LysM domain profile. 111 158 IPR018392 -
Prci2g0435 422 CDD LysM 178 220 IPR018392 -
Prci2g0435 422 SUPERFAMILY LysM domain 177 222 IPR036779 -
Prci2g0435 422 MobiDBLite consensus disorder prediction 350 374 - -
Prci2g0435 422 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 14 330 - -
Prci2g0435 422 SMART LysM_2 178 221 IPR018392 -
Prci2g0435 422 SMART LysM_2 112 159 IPR018392 -
Prci2g0435 422 SUPERFAMILY LysM domain 111 160 IPR036779 -
Prci2g0435 422 Gene3D LysM domain 168 229 IPR036779 -
Prci2g0435 422 ProSiteProfiles LysM domain profile. 177 220 IPR018392 -
Prci2g0435 422 Pfam LysM domain 113 159 IPR018392 -
Prci2g0435 422 Pfam LysM domain 179 221 IPR018392 -
Prci2g0435 422 CDD LysM 111 158 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0435 Prci-Chr2 3146149 3149570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0435 4 421 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 65.000 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0435 - - qsa:O6P43_019748 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0435 2 3146149 3149570 Prci2g0435 2 3146149 3149570 ECH