Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0313 ATGACGACTCCCACCACTCATCCCGTTTCCCAACCCCCTCAGATGCCTTTGTCTCGCAAATCATCATCTTCTCCCTCTCCCATCCCATCCACACCTTCATCTATTTATCCTTTTCCCCTCAAACAAACTGACATCGATGCCGCTGGCAATGCCGCTAATTTCGTTCACAGCACGGAGCAACCACCTCCCCACCGCCGCCGCCTTACTCGAGTCCGGAAGCTTCGCCACCTCACTGACCATGATGTTGGCTTGCACCTCACTGACGATTCTTCGCTCCTGGCTTCGCCTCCGCCCTCTCTCAAGTCTCGCTCATCGGGTGGTTCCGAGCACTGGTCCTCCTCCGCTGTGCCTCAACCTCTCCCGCTTCCCGAATCACCGTTGACTCGCCGGCCGGAGTCAACCGGTCCCAATCCCGGCCAGTTCCAGCTCGGATCTCCTTGCGTAGACCGTTCGGGCTTTGCTTTCGGGAGGAAGACGATGGATCACGATACATTGATAAATATGAAATCTTGGAGCAATATGGATAGATCTTGTGATCCAACCACTGCAAGCACAAAGTTTAATTTGAGAGTAAACATCCCAGTTGCAAGTTTCTTGATAGGTCACAGTTCATGTAAAGATCGAGCAATCTCTCGTGATACTGACTCTGAAAGTATTTATGACTCAAGATTGCGCGTGGCCACAAAGAGTGCCCCAACAAGTGTTTTTTCCAGTCCTGTTACCAGTCCTCGGAGATCAAGCAATGTAGATTTCACTGATCATTTCATTACTGCTCAAGAATTTCATGACAACCCAGTTGGCCATCCTTCGAAGGTGTCACCACCCTTGACTGTTCAAAGTCCAGATCATTCTTCTCTCCGTAGCCCAGGGTGCCGTAGTCCTTTCCTCAATCTCAAAATCCTAGATGGACCTCAGCATAGATTTCATTCCAGGGCGTGGCCAGAAAATAACCATGTTGACGCACATCCTTTGCCTCTTCCTCTTCCTCCTGGAGCTTCACCACCAGCACAATCATCTGTGCAGCGTCAATCAAGTGCCAAGCTTCATTCATTTGAAAGTCAATTTTCAGTGAAAGGTCAATGGCAGAAAGGAAAACTTATTGGACGGGGCACTTTTGGAAGTGTTTATCATGCGACAAACCTAGAGACCGGTGCTTCATGTGCAATGAAGGAGGTGGATCTCATTCTAGATGACCCTAACTCTTCCAACTGTATAAAGCAACTAGAGCAGGAAATCAAGATTCTTCGTCAACTACAGCATCCAAATATTGTGCAGTATTATGGCAGTGAAACAGTTGGTGATCACTTGTGCATATACATGGAGTATGTTCATCCAGGGTCTGTTGATAAATTTGTGCGGGCAAATGGTGAAGCGATGACAGAGTCTGTAGTTCGCAATTTTACATGGCATATTCTCTCAGGGTTGGCTTACTTGCACAGCACCAAAACTATCCACAGGGATATCAAAGGAGCAAACTTACTTGTTGATGCATCAGGCACTGTCAAGCTTGCTGATTTTGGAATGGCGAAAGTTCTAACAGGGAAATCATATGACCTTTCTTTAAAGGGCAGTCCATACTGGATGGCTCCTGAGGTCATGAAGGCTGCCATGATGAAAGATGACAATCCTGACCTTGCCTATGCTGTTGATATCTGGAGCTTAGGTTGCACTATCATAGAGATGCTGACAGGAAGACCTCCATGGAGTGACTTTGAAGGGCCTCAAGCCATGTTCAAGGTACTGCACAATTCGCCATCAATACCAGAAACATTATCTTCAGCCGGAAAGGATTTTCTTCAGAGATGTTTTGAAAGGGATCCCGCAAATCGACCATCAGCAGCAAAGCTTCTTGAGCATGCCTTTGTACAAAATTTGCATGACCAAGAAGCTTTAGTTCGCCCACAATTATATCCCAGAGAAGACCCTGAAGAAAATTCACGTAGTCCCAAAGACAGTACTGCACGTAACCGTGATGTAATTCGAGCCTCCATGAGCTCACGGATCATCAACAAAATCCAGAAATTTATCGGTGATTCTTCCCAACAATATAATGCTGAGGATTCTAAATATTCTACATCTCATCACCCTCCTTACTCTCTGCCAGAAGGTAAAATTCCTCAGTCGTCCTTGAAACCAGCTGCCCTCAATTACGTTTCTGCTTCAAAATCCAGCAACATATCCCTCGCTGTAATGAGATTCATCACGCACTTTTGA 2214 0.4657 MTTPTTHPVSQPPQMPLSRKSSSSPSPIPSTPSSIYPFPLKQTDIDAAGNAANFVHSTEQPPPHRRRLTRVRKLRHLTDHDVGLHLTDDSSLLASPPPSLKSRSSGGSEHWSSSAVPQPLPLPESPLTRRPESTGPNPGQFQLGSPCVDRSGFAFGRKTMDHDTLINMKSWSNMDRSCDPTTASTKFNLRVNIPVASFLIGHSSCKDRAISRDTDSESIYDSRLRVATKSAPTSVFSSPVTSPRRSSNVDFTDHFITAQEFHDNPVGHPSKVSPPLTVQSPDHSSLRSPGCRSPFLNLKILDGPQHRFHSRAWPENNHVDAHPLPLPLPPGASPPAQSSVQRQSSAKLHSFESQFSVKGQWQKGKLIGRGTFGSVYHATNLETGASCAMKEVDLILDDPNSSNCIKQLEQEIKILRQLQHPNIVQYYGSETVGDHLCIYMEYVHPGSVDKFVRANGEAMTESVVRNFTWHILSGLAYLHSTKTIHRDIKGANLLVDASGTVKLADFGMAKVLTGKSYDLSLKGSPYWMAPEVMKAAMMKDDNPDLAYAVDIWSLGCTIIEMLTGRPPWSDFEGPQAMFKVLHNSPSIPETLSSAGKDFLQRCFERDPANRPSAAKLLEHAFVQNLHDQEALVRPQLYPREDPEENSRSPKDSTARNRDVIRASMSSRIINKIQKFIGDSSQQYNAEDSKYSTSHHPPYSLPEGKIPQSSLKPAALNYVSASKSSNISLAVMRFITHF 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0313 737 MobiDBLite consensus disorder prediction 92 115 - -
Prci2g0313 737 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
Prci2g0313 737 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 75 634 - -
Prci2g0313 737 Gene3D Transferase(Phosphotransferase) domain 1 352 695 - -
Prci2g0313 737 MobiDBLite consensus disorder prediction 635 657 - -
Prci2g0313 737 MobiDBLite consensus disorder prediction 1 69 - -
Prci2g0313 737 SUPERFAMILY Protein kinase-like (PK-like) 339 652 IPR011009 -
Prci2g0313 737 MobiDBLite consensus disorder prediction 635 658 - -
Prci2g0313 737 MobiDBLite consensus disorder prediction 1 29 - -
Prci2g0313 737 MobiDBLite consensus disorder prediction 315 345 - -
Prci2g0313 737 Pfam Protein kinase domain 362 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0313 737 SMART serkin_6 361 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0313 737 FunFam Predicted protein 357 640 - -
Prci2g0313 737 MobiDBLite consensus disorder prediction 261 289 - -
Prci2g0313 737 MobiDBLite consensus disorder prediction 273 289 - -
Prci2g0313 737 MobiDBLite consensus disorder prediction 87 146 - -
Prci2g0313 737 ProSiteProfiles Protein kinase domain profile. 361 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0313 Prci-Chr2 2185945 2193372 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci2g0313 Pkinase 5.7e-68 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0313 2 2185945 2193372 Prci2g0313 2 2185945 2193372 ECH