Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0311 ATGGCGGTGACGGACTTCTTCGCGGGCGAAATAGCCACGGAACTTATGAAACTGCTCGTAGACATTTCTCGCAAGTCACTTTTGTGCAAATCAAGTGCGGACCAGCTCCACAACTACATCAACCAACTCCTCCCCATCATTGAAGAAATCAAATACTCCGGCGTCGAGCTCTCCGCCGTCCGCCAATCCCAGCTCGATCGCATCTCCGAGATGCTCCGTTCTGGCGTCGAGCTCTCCCACAAGGTTCTCTCCTCCAGCCGCTGGAACGTCTACAAGAACTTGCAGCTCGCCAAGAAGATGGAGAAGCTCGAGAAGAACGTCTCCAGGTTCCTTAAAGGTCCCATGCAGGCTCATATCTTGGCCGATGTCCACCACACCCGCTTCGAGATGGCCGAGCGCTTTGATAGGTTGGAGGCCTCCAACCGCCGCCTCGAGCAGTACTTCGGAGCCATCAAGATTGGAGTTGGGGGTGGAGGGTGGGTGGAGCAGGCCGTCAGAAGTATGGAAGAGGATGAGAGAGTGGACGGTAATTCTGGGAGCTTTAGAATTGGTTTGGATTTGGGGAAGAAGAAAGTTAAGGAATTGGTTGTTGGGAGACAGGATTTGCCCGTTGTTGGGATTCGAGGCATCGGAGGATCGGGCAAGACCACTCTTGCTAGAGAGATCTACAGAGATGATCATGTTCGATGTTATTTCCAGAGAATCTTGTTCCTGACAGTGTCACAGTCTCCAAACGTGGAGCTGCTGAGAGCCAAAATATGGGGATTTATTATGGGCAATGAACATTTGAATCCTAATCATGTGACTCCACAGCGGAAGCCGCAATTTGAATGCAGAACTGAAACGCGAATCCTGATAGTTCTGGATGATGTGTGGTCGCTCTCTGTTCTAGAACAGCTTGTCTGGAGAATACCTGGTTGTAAATTCCTGGTGGTCTCAAGATTCAACTTTCCCACATTTTTTTCTGCAAGCTACGAAGTTGAGCTGTTGAGCGAAGAGGATGCCCTATCTCTGTTCTGTCACCATGCCTTTGGACAGAAGTCAATCCCTTTAGCTGCAAATGGGAATTTGGTCAAGCAGGTAGTGACCGAGTGTGGAAGACTTCCATTAGCCCTTAAAGTCATTGGAGCTTCCTTGCGGGATCAGTCTGAGATGTTTTGGGCAGGTGTCAAAAACAGGCTATCCCAAGGCCAGAGCATAGGCGAATCATATGAAATCAATCTAATTGAAAGAATGGCAATCAGCATCAATTACCTACCCGTGAAAATCAAGGATTGCTTCCTGGATCTGTGTTCTTTTCCAGAAGACAAGAAGATTCCTCTCGAAGTACTCGTCAATATGTGGGTTGAAATTCATGATATTGATGAAACCGAAGCTTTTGCTATAGTCGTTGAGCTCTCAAACAAGAATCTTCTCACCTTGGTGCAAGAGGCACGTTCCGGAGGTATGTATAGCAGTTGTTTTGAAATCTATGTCACTCAACACGATGTATTGAGAGACGTAGCTCTTAATTTGAGCAGTCGCGAGAGCATTAATGAGCGCAGGCGGTTAGTCATGCCAAAAAGGGTGAACGGAGTCCCTAAAGAATGGTCCAGATATAAAGATCGACCATTTGAGGCTCAGATTGTTTCCATTCACACTGGTGAAATGAAAGAAGCGGATTGGTTTAGAATGGAATTTCCCAAGGCCGAAGTGCTGATCATCAACTTCTCCTCCAGTGAATTCTTCTTGCCGCCCTTCATCGATAGAATGCCAAATTTGAGGGCATTGATATTGATAAATTACAGTGCATCATATGCTTCCATTCACAATTTTCGTGTTTTTGAGAATCTGGCTCCTTTGAGGAGCCTCTGGCTTGAAAAAGTTTCAATCCCTCAGTTTTCAGATTTTCCCCTAGTAAGCTTGCGCAAATTATTTGTAGTCCTCTGCAAGATAAATGACAACGTGGATGGGGGAATGACAGATTTGTCTAAGGTCTTCCCGAACCTCTCAGAGCTCACACTTGATCACTGTGATAACTTAACTGAGCTTCCCCCAAGTATTTGCAAGATGGAATCACTTCAGAATCTAAGCCTCACCAACTGCCACAATCTAGTCAAACTTCCTGATGAACTGGGAAAGCTGCGATCTCTAGAGATCCTGCGATTATATGCTTGTCCAGCTCTGGAAACGCTTCCTCCGAGTATCGGCCAGCTGATAAGACTCAAGTACATAGACATATCTCAATGTGTTAATCTCGGACGGATTCCAGTGGAGATAGGAAAACTAGTAAATTTGGAGAAGATGGACATGAGGGAGTGCTCTTCGATTAGGGTTTTACCAAAGTCTGCAACGTCATTGAAGTCACTGCGCCTTGTGATTTGTGATGACGAGGTGTCAGGGATGTGGAGAGATGTGGAGAAGGCTAGGCCAGACGTTTGCATTCAAGTATCAGAACAGTCTTATGACCTGGATTGGCTTAATGAAAAATGA 2472 0.4636 MAVTDFFAGEIATELMKLLVDISRKSLLCKSSADQLHNYINQLLPIIEEIKYSGVELSAVRQSQLDRISEMLRSGVELSHKVLSSSRWNVYKNLQLAKKMEKLEKNVSRFLKGPMQAHILADVHHTRFEMAERFDRLEASNRRLEQYFGAIKIGVGGGGWVEQAVRSMEEDERVDGNSGSFRIGLDLGKKKVKELVVGRQDLPVVGIRGIGGSGKTTLAREIYRDDHVRCYFQRILFLTVSQSPNVELLRAKIWGFIMGNEHLNPNHVTPQRKPQFECRTETRILIVLDDVWSLSVLEQLVWRIPGCKFLVVSRFNFPTFFSASYEVELLSEEDALSLFCHHAFGQKSIPLAANGNLVKQVVTECGRLPLALKVIGASLRDQSEMFWAGVKNRLSQGQSIGESYEINLIERMAISINYLPVKIKDCFLDLCSFPEDKKIPLEVLVNMWVEIHDIDETEAFAIVVELSNKNLLTLVQEARSGGMYSSCFEIYVTQHDVLRDVALNLSSRESINERRRLVMPKRVNGVPKEWSRYKDRPFEAQIVSIHTGEMKEADWFRMEFPKAEVLIINFSSSEFFLPPFIDRMPNLRALILINYSASYASIHNFRVFENLAPLRSLWLEKVSIPQFSDFPLVSLRKLFVVLCKINDNVDGGMTDLSKVFPNLSELTLDHCDNLTELPPSICKMESLQNLSLTNCHNLVKLPDELGKLRSLEILRLYACPALETLPPSIGQLIRLKYIDISQCVNLGRIPVEIGKLVNLEKMDMRECSSIRVLPKSATSLKSLRLVICDDEVSGMWRDVEKARPDVCIQVSEQSYDLDWLNEK 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0311 823 Pfam NB-ARC domain 191 409 IPR002182 GO:0043531
Prci2g0311 823 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
Prci2g0311 823 Gene3D - 182 317 IPR027417 -
Prci2g0311 823 SUPERFAMILY RNI-like 573 785 - -
Prci2g0311 823 Gene3D Ribonuclease Inhibitor 552 803 IPR032675 -
Prci2g0311 823 PRINTS Disease resistance protein signature 365 379 - -
Prci2g0311 823 PRINTS Disease resistance protein signature 682 698 - -
Prci2g0311 823 PRINTS Disease resistance protein signature 204 219 - -
Prci2g0311 823 PRINTS Disease resistance protein signature 278 292 - -
Prci2g0311 823 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Prci2g0311 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 430 IPR027417 -
Prci2g0311 823 Gene3D - 329 409 IPR042197 -
Prci2g0311 823 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 820 IPR039203 GO:0050832
Prci2g0311 823 Gene3D - 410 501 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0311 Prci-Chr2 2175478 2178924 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0311 2 2175478 2178924 Prci2g0311 2 2175478 2178924 ECH