Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0158 ATGGCGTCTCTAATTTCTTCCCCGTTGTCAGCTTCATTTTCTATCGTTCGTTTCCGTCAAACTTCTGTGTTTTCCACTCGCTTGCTTCCTGCAAGAAATCTTCAACAGAGATGCAGTTCTGATAATTATGGATGGCGCTCAGTTAAGTGCAGACTTCTCAGCGTCAATGTCCCTCCTTCCTCAAATCTTCCGACAATGATCAAGGAACCTCACAAGTATTTTGATCAAGCAATCATCACAGTTCGTTCGGGTGATGGAGGCCATGGAACTATACTTAACATGCCATACCAGAGAATCAATAGTTCGCAAGGAAGACATGAAAAAGAAAAGACAAGGAAAAAAAACTCTTATAGAAGAGATTTCGATGGATCGCTTATCCTACCTTTGGGTGGGCATGGAGGGGATGTGGTGATTTATGCGGATGAGGAAAAAGATTCATTATTGGAATTCCACAGCAAAAGCCGCTATAATGCAAAGCGTGGTGGCAATGTTGATGCAATGGGTATTTTGACCTCACAATTGCATGATGGACTTGCTGCTCCAACTCTCCGTATTCCTGTGCCTGTAGGTACCGTTGTAAAACACAAGAGAGGGAAATTGCTGGCCGATCTGGCACAACCAGGTGATGAAGTTCTTGTTGCGAGGGGCGGACAGGGAGGGATTAGCTTGTTAGATCTGCCACGGCATAAAAGGAAAAAGATGATGGCATTGACAACAAATGTGTTGAGAGATGATACTGATAAGGTTTTAGTTCATGGTCAGCCAGGTGAGGAAGTTAGCTTGGAGTTGATCCTACGAGTTGTTGCCGATGTTGGTCTAGTTGGACTTCCGAATGCTGGGAAATCAACACTACTGGCAGCCATTACACTAGCAAAACCGGATATTGCTGATTATCCTTTTACAACATTAATGCCAAACCTTGGACGCCTAGGTGGTGACCCCAACTTGGGAGCTGGGATGTATTCATCTGAAGCTACATTAGCAGATTTGCCCGGTCTTATAGAAGGCGCTCACTTGGGAAAGGGTCTTGGTCGAAATTTCCTGAGGCACCTCAGGAGGACGCGGCTTCTGGTCCATGTTGTTGATGCAGCCACTGAGAACCCCATCAGTGATTATAGAACTGTGAGGGAAGAGTTGCGCATGTATAACCCTGAATACCTTGACCGCCCGTACATTGTGGTTCTGAATAAGATTGACCTTCCAGAGGCAAAGGACAGACTTCCATCATTGGCTGAAGAAATACTGAGAATTGGGAGCATTTGTACACCGGGGCCAGAACTAACCTCTGAAGCTCCAGTTCAATCATTATCCAACGAACTTGTTGTAAAGGAAAAGAAACTAGAGGATTATTCACCACCCCTGTCCGTTGTGGGCGTTAGTGTTCTGAAGGGAATCATGATAGATGACATGTTAAAGGAGATAAGGAAAGCTTTAAGGGAGTGCATGGATTCCACTGAAGTATCATCGGCTTTGAATTGCCCTTGGAAATTGGGAAGTGATGTTTTGTCGAAACCGCATTGGTCGCAAATCTGGAAGTGA 1539 0.4496 MASLISSPLSASFSIVRFRQTSVFSTRLLPARNLQQRCSSDNYGWRSVKCRLLSVNVPPSSNLPTMIKEPHKYFDQAIITVRSGDGGHGTILNMPYQRINSSQGRHEKEKTRKKNSYRRDFDGSLILPLGGHGGDVVIYADEEKDSLLEFHSKSRYNAKRGGNVDAMGILTSQLHDGLAAPTLRIPVPVGTVVKHKRGKLLADLAQPGDEVLVARGGQGGISLLDLPRHKRKKMMALTTNVLRDDTDKVLVHGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPNLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATENPISDYRTVREELRMYNPEYLDRPYIVVLNKIDLPEAKDRLPSLAEEILRIGSICTPGPELTSEAPVQSLSNELVVKEKKLEDYSPPLSVVGVSVLKGIMIDDMLKEIRKALRECMDSTEVSSALNCPWKLGSDVLSKPHWSQIWK 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0158 512 Gene3D GTP1/OBG domain 72 267 IPR036726 -
Prci2g0158 512 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 269 479 IPR031167 GO:0005525
Prci2g0158 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 270 487 IPR027417 -
Prci2g0158 512 ProSiteProfiles Obg domain profile. 71 268 IPR006169 -
Prci2g0158 512 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 66 476 IPR045086 GO:0003924|GO:0005525
Prci2g0158 512 Pfam GTP1/OBG 130 266 IPR006169 -
Prci2g0158 512 CDD Obg 269 478 IPR031167 GO:0005525
Prci2g0158 512 ProSitePatterns GTP1/OBG family signature. 329 342 IPR006074 GO:0005525
Prci2g0158 512 SUPERFAMILY Obg GTP-binding protein N-terminal domain 73 235 IPR036726 -
Prci2g0158 512 Gene3D - 268 487 IPR027417 -
Prci2g0158 512 PRINTS GTP1/OBG GTP-binding protein family signature 271 291 IPR006073 GO:0005525
Prci2g0158 512 PRINTS GTP1/OBG GTP-binding protein family signature 344 362 IPR006073 GO:0005525
Prci2g0158 512 PRINTS GTP1/OBG GTP-binding protein family signature 292 310 IPR006073 GO:0005525
Prci2g0158 512 PRINTS GTP1/OBG GTP-binding protein family signature 327 342 IPR006073 GO:0005525
Prci2g0158 512 NCBIfam small GTP-binding protein domain 270 415 IPR005225 GO:0005525
Prci2g0158 512 Pfam 50S ribosome-binding GTPase 270 397 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0158 Prci-Chr2 1316272 1329681 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0158 2 1316272 1329681 Prci2g0158 2 1316272 1329681 ECH