Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0135 ATGGATGGCGAAGTGAAGAGGTCTGGGACCAAGAAAAGATCGAAACAGGTGGAAATTAGTTTTGATTCGGATGATAACGAACCCATTGGGTCTCTATTTAAGCTGAGGAGGCCACGTAACTCCAAGAACGTTAATTTGACTTTAGAGGGCACTGGTGATAGATTTCAGAATGCTGAGGCTGCCGGGAAGAAATTGGTTGACGTAGAAGAGGATTCTGGGGGCATGGATGACACCTTAGCCAGTTTCCGGAAAAGATTGAAGGGTCCAAAGAGAGATCAGGGATCTGGAACCGCCAGATTAAGAAATTCTTATTTGAATGTGGTTGCTGGTAGTTCTCTGGATGCTGGGGATCTAGAAAATGTAAAGGAAGGGCTGGTTTTGGGTAATAATGGATCTGATACTATGGTTGAAAAAGCAGTGGGCGGCAATCAAGGAAACTTTGAGAGATTTCACATGGATCTTAAGGGAAGTGAGGTTCACACTACATCCAATGATGATTTGATTGCTTGGGAATCTAGGAGTACATTGAAGGATGACAAAGGTTTGGTTTTATTACCGGGCAATGGTTTACGACTCTCCTCTGTAGAACAGAAGGAAGACTCACTGTCTTCAATTTTCCAAAACGCACAGTCTATTTTGAGTAGGAATTCTTGTGCATCATCAAGTTCAAAGCAGAATACTGGGAGCCAGATTGTGGGCGATGGGTTGAACCCTGTTTTGAAAAGTATTCCAGAATCTGTAGAGTCTATGGCTGATTGTGGATCTAAATCTAGTTCTTCCTTAAAATTAGGCAGTGGACTTTTGCAATCTGCCAATGATTTTCCTCAAGGATCACCTTCACATAGGCCTGTTTCAGCATCTGTAATGGATAATAAGAAGTTTGGTTACGGCTGTCTTCAAGAGGAAATTTCCAAGGGCATTTTTCATTCAAATATTCAAAATGGATTGGCAGCTGGAGATAGCCAGCAAAAAGTTAAACTTGGTGATGATTTGGAATCTATGACTGATGTCTGCAATAAAGACAGCCGGCAATCATCTTTTGTTCAATTTGGAGATGTTTGCTCTCCTTCCCACCAAAAGGTTGCATTTCAAGAAAGATTTGTCAGTGATGGTTTGGAGCAGTGTTCTGTCAGGTTATGTGGTCCTGAAGAAATGGTTGAAACTGCCTCACTCTTAGAATTGGGGGAAGGGCCATGTGGTGTTAGTGAGACTGAGTTCAAGAAAAGGTTAACAGATAAAATGGTAGTAATGTGTAATGATAGAAGAGAAAATGACGATCTTACTTCTGTGGAGAAAGAAATTGCCTCACCTCCTCCAGTCTCCAAGCCCCTGAATAGATCATGTGAACATTTTTATGACGATGATCAGCTGGTTTCTGGAAAAGAGTCCGAGGAATCCTCCAGACATAGGGCTCTGAAATTCTCTGGATTCCATGACAAGGTAGATGGTGGTAGTCTGGATACAAAAGGTGAACTGCAAGATCTTGCTTCAGGTTTTCCAGCGGAAAAAAAAACTGTAATTTTTGTTGGTAATTTATCTCTAATGATGTCTACTGAAGCTGAGGAGAATAAATTGGCTGCCCAGTCAAATTGCTCCAAAAATCCCTTAGAACCTTGTGTCATTCCAGCTGATTCTACTGTTTCCATTCAGAAATGTAGCTCAGTATTACATCAAATTCAATCTTCAAATGACACATCTGAAGAGGGATCTCTTCCAAATGATGGTCATCTTTATGACAAGAAAGGAGCTGATGGAACCTCACCACCTGCAATTCTGGAAGAAAATTATAATTACGCAGAATGTGCGGTCTCTGGGTCGGAGTTTTCTGACAAACATGATAAGATATCAGCTGTTCAGCGTGCCATTCGTAAGGCCAAAAAGCGCAGGCATGGAGACATGGCTTATGAGGGGGATGCTGACTGGGAGATTTTAACTAACGATCAATCTTTTCTTGAAAGCCAAGGAGTTGTAGATGATGAACGCACTCTCAGACCAAGAATGAAGAGTGCTTCCTCTTTGAATGCTGATGAAGAGTCAGGTAGCATTTCAGCAGCAGTTTCAGCTGGTCTGAAAGCTCGTGCAGTTGGTCCAGTTGAAAAGATAAGATTTAAGGAGATCTTGAAGCGTAAAGGTGGTCTTCAGGACTATTTGTATTGTAGAAACCAGATCTTAAGTATTTGGAGCAGAGATGTCACTCGCATTTTGCCTCTTTCTGACTGTGGAGTTAGTGATACTCCATCTGAGGATGAATCTCCTCGTTCTTCTCTTGTTAGGGAAGTCTATGCATTTCTTGATCAATGCGGTTATATAAATGTTGGGATTGCCTCTCACAAGAATGCGGGAGCCAGTGCTGGGAATAGTTATAAACTTGTAAAAGAAAAGGGATTTGAGGACAGTTCCACAGCTTCCATGGCTGACTCTGAAGACGGAGTTACCTTCATTGTAGGCCATGGTAATAGGTCAGATACTTCCATGAAAATTGATGGTCTCAAAGTTGATTATGTAAACTTGGCTCCTGAAGCTATTGAAGGCAACAGGTATGGTGATCCAGTGGCGTTGGATCTATCAAATATAATGCTTCATGAAGAAAGAAAAATTGATGAGTACCAGGAAAATGATGGGATTCAGGCAAGTGGAGTTGGGCTCATACACATTAACAGTTCTGATCCTTCTTCCAACAATTCTGATTGCAGAATGACTTCTATTGTAGCCACTGAGAAAAGCAATGAATCTACCTGTGTTAAATATTCCTTAGATGATCAGATACCAGATCCTTTGCAGTCTGTTTCAGAGGCCATGAAAAGAGTGGTTGTCATTGGAGCTGGTCCTGCTGGATTAACTGCTGCTCGCCACTTGCAACGTCAGGGTTTCTCTGTGACTGTACTTGAGGCTAGGAATAGAATAGGAGGTCGTGTATATACTGACCATTCATCTCTTTCTGTTCCTGTGGATCTTGGTGCTAGCATTATCACTGGAGTTGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCTTCATTGATTTGTGCTCAATTGGGCCTTGAGTTGACTGTGCTAAAAAGTGACTGTCCTCTTTATGACATAGTAACAGGACAGAAGGTTCCTGCAGACCTGGATGAGGCATTGGAAGCTGAATATAATAGTCTTCTGGATGACATGGTATTGCTTGTTGCTCAGAAGGGTGAACAAGCTATGAAAATGTCTCTAGAAGATGGTTTAGAATATGCTCTTACAAGGCGTCGAAGGACACGTTTTGGTAGAAGTAGTGAAGAAGTTGAACAAAATAATTTTGCAGATGTATCATTCAATGCCAAAAGGGGCGGTGCTGAGGAAAACATTAGCCAGGAGGAAGTTTTGAGTCCTCTAGAACGGAGGGTTATGGATTGGCACTTTGCTCATTTAGAGTATGGTTGTGCGGCTCTTCTTAAGGAGGTTTCCCTTCCCTACTGGAATCAAGATGATGTTTATGGTGGATTTGGGGGGGCTCATTGTATGATTAAAGGGGGTTATAGTGCTGTTGTGGAGTCTCTAGCAGAAGGGCTTCCTATTCACTTGAACCATGTGGTAACAAATGTGTCCTATGGTAAGGAGCCTGGCCGGAGTGATATAGTCAGAATTTCTACATCAAATGGCAAGGAGTTTGTTGGTGATGCTGTCCTTATCACTGTTCCACTGGGCTGTTTGAAGGCTGAAACTATAAAATTCTCCCCATCTTTGCCTCAGTGGAAATGCTCTTCCATCCAGCGTCTTGGGTTTGGAGTGCTCAATAAAGTGATTTTGGAATTTCCTAGTGTGTTTTGGGATGATGCAGTGGACTACTTTGGAGCAACAGCAGAAGAAACAAGCAGAAGAGGTTACTGCTTTATGTTCTGGAATGTAAGGAAAACAGTTGGGGCTCCTGTCCTTATAGCATTGGTTGTTGGTAGGGCTGCAATAGATGGTCAATGTTTGAGTTCTGCTGATCACGTCAACCATGCATTAATGGTTCTCCGTAAACTTTTCAGGGAGGATGCAGTACCTGATCCTGTTGCATGTGTTGTGACTGATTGGGGTCGAGATCCTTTTAGTTATGGTGCTTACTCATATGTTTCTGTCGGAGCATCTGGAGAAGACTATGATATGTTAGGGAGGCCAGTTGATAACTGCTTGTTTTTTGCTGGTGAAGCAACCTGCAAAGAGCATCCTGATACAGTTGGTGGTGCAATGATGAGTGGACTCCGGGAGGCGGTGCGTATAATTGACCTATTGAACACTGGTAATGATTATACTGCTGAAGTGGAGGCAATGGAGGCTGCACTCAGACAGTCGGATAATGAGAGGGATGAAGTTAGGGATATAATAAAGAGACTAGATGCAGTTGAACTTTCTAATGCCTTGTACAAGAATTCTTTAGATGGTGCTCAAATCATTACTCGTGAAAGTTTACTTAGGGACATGTTCTTCAATGCGAAAACCAGTGCTGGTCGCTTGCATGTGGCCAAACAATTGTTGAGTCTTCCTGTTGATAACTTGAAATCCTTTGCTGGGAGTAAAGAGGGGCTTACTATTCTTAACTCATGGATACTGGACTCAATGGGGAAGGATGGGACCCAACTCTTACGGCACTGTGTGCGTCTCCTTGTGCGGGTTTCAACTGATCTGCTTGCTGTGCGCTTATCAGGCATAGGGAAAACAGTGAAGGAAAAAGTTTGTGTACATACTAGCCGTGATATACGTGCTATAGCAAGCCAGTTGGTCAGTGTATGGCTTGAAATCTTCCGCAAGGAAAAAGCTTCTAGCAGTGGATTGAAGTTTTCAAGACATGCAACTACTGCAGATTTATCAAAGAGAAAATCTCTGAAAGATTCAACCTCAGGAAAGCCACCTCTGACTATGCATCATGGTGCTTTTGAGAATAAAGGAGGTTTGCTGGCTTCTGCGTCTGCTGGAAGTAGTTCACCTTCCATTGCAAATGTGAAGAAATTGCACAGCAAACAAGTAAGACAACAGGAGGCAAATGACTCCAGACACAGCGTCAATTCTTCCAGGTCCCATGGTTCAGTAGGCAAAGCAGTTACTAAGGGAGAGGGTAACTGTTATGTTTTGTCTGAAGAAGAACAGGCCGCAATTGCAGCAGCAGAAGCTGCTCGTGCTAAAGCACTTGCTGCTGCTGAGGCTTATGCCTCAGCAGAAGCCAGGTGCAATACACTGCTGCAACTTCCAAAGATACCCTCATTCCATAAATTTGCTAGACGGGAGCATTATCCATTGAATGATGAATATGATAGTAGGAAAAAGTGGTCTGGAGGGGTTTTAGGAAGGCAAGATTGTATTTCAGAGATAGATTCTAGGAATTGCCGAGTTAGGGACTGGTCAGTTGATTTTTCTGCTGCTTGTGTTGACCTTGGCAATGCCAGAAGGTCAGTAGATAACCTATCACAGCGGAGTCATTCAAATGAGATTGCTAGCCATTTAAATTTCAGAGAGCACTCAGGAGAAAGTGTTGCTTTGGACAGCAGTTTATATACAAAAGCGTGGATCGACACAACTAGTGGTGTGGGGATTAAAGACTATCATGCCATTGAGAGATGGCAATCTCAAGCAGCTGCAGCTGATTCTTATTTTTCTAACCCAACCATACATTTGAAGGATGAGGAAGAATCAAATGCCTGTTCAAGATTACCCAGCTGGAAGCGTGATTGTATGGCAAATGAGAGCTCTGTCTCACAGGTTACTGTAAATAGGGAGGCCTCAAAATGTCATTCTCGAGGGGCGGATCGCATTAAACAGGCTGTTGTTGATTATGTTGCATCGCTGCTTATGCCCCTTTATAAAGCGAGGAAACTAGATAAGGATGGGTACAAGGCTATAATGAAGAAAAGTGCGACTAAGGTGATGGAGCAAGCCACAGATGCCGAAAAAGCCATGGCTGTTCATGAATTTCTAGATTTTAAGCGAAAGAATAAGATTCGATCCTTTGTGGACAAATTGATTGAGAAATACATGGCAGTGAAGCCAGATGTAAAATCTTAA 6015 0.4269 MDGEVKRSGTKKRSKQVEISFDSDDNEPIGSLFKLRRPRNSKNVNLTLEGTGDRFQNAEAAGKKLVDVEEDSGGMDDTLASFRKRLKGPKRDQGSGTARLRNSYLNVVAGSSLDAGDLENVKEGLVLGNNGSDTMVEKAVGGNQGNFERFHMDLKGSEVHTTSNDDLIAWESRSTLKDDKGLVLLPGNGLRLSSVEQKEDSLSSIFQNAQSILSRNSCASSSSKQNTGSQIVGDGLNPVLKSIPESVESMADCGSKSSSSLKLGSGLLQSANDFPQGSPSHRPVSASVMDNKKFGYGCLQEEISKGIFHSNIQNGLAAGDSQQKVKLGDDLESMTDVCNKDSRQSSFVQFGDVCSPSHQKVAFQERFVSDGLEQCSVRLCGPEEMVETASLLELGEGPCGVSETEFKKRLTDKMVVMCNDRRENDDLTSVEKEIASPPPVSKPLNRSCEHFYDDDQLVSGKESEESSRHRALKFSGFHDKVDGGSLDTKGELQDLASGFPAEKKTVIFVGNLSLMMSTEAEENKLAAQSNCSKNPLEPCVIPADSTVSIQKCSSVLHQIQSSNDTSEEGSLPNDGHLYDKKGADGTSPPAILEENYNYAECAVSGSEFSDKHDKISAVQRAIRKAKKRRHGDMAYEGDADWEILTNDQSFLESQGVVDDERTLRPRMKSASSLNADEESGSISAAVSAGLKARAVGPVEKIRFKEILKRKGGLQDYLYCRNQILSIWSRDVTRILPLSDCGVSDTPSEDESPRSSLVREVYAFLDQCGYINVGIASHKNAGASAGNSYKLVKEKGFEDSSTASMADSEDGVTFIVGHGNRSDTSMKIDGLKVDYVNLAPEAIEGNRYGDPVALDLSNIMLHEERKIDEYQENDGIQASGVGLIHINSSDPSSNNSDCRMTSIVATEKSNESTCVKYSLDDQIPDPLQSVSEAMKRVVVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELTVLKSDCPLYDIVTGQKVPADLDEALEAEYNSLLDDMVLLVAQKGEQAMKMSLEDGLEYALTRRRRTRFGRSSEEVEQNNFADVSFNAKRGGAEENISQEEVLSPLERRVMDWHFAHLEYGCAALLKEVSLPYWNQDDVYGGFGGAHCMIKGGYSAVVESLAEGLPIHLNHVVTNVSYGKEPGRSDIVRISTSNGKEFVGDAVLITVPLGCLKAETIKFSPSLPQWKCSSIQRLGFGVLNKVILEFPSVFWDDAVDYFGATAEETSRRGYCFMFWNVRKTVGAPVLIALVVGRAAIDGQCLSSADHVNHALMVLRKLFREDAVPDPVACVVTDWGRDPFSYGAYSYVSVGASGEDYDMLGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDLLNTGNDYTAEVEAMEAALRQSDNERDEVRDIIKRLDAVELSNALYKNSLDGAQIITRESLLRDMFFNAKTSAGRLHVAKQLLSLPVDNLKSFAGSKEGLTILNSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSVWLEIFRKEKASSSGLKFSRHATTADLSKRKSLKDSTSGKPPLTMHHGAFENKGGLLASASAGSSSPSIANVKKLHSKQVRQQEANDSRHSVNSSRSHGSVGKAVTKGEGNCYVLSEEEQAAIAAAEAARAKALAAAEAYASAEARCNTLLQLPKIPSFHKFARREHYPLNDEYDSRKKWSGGVLGRQDCISEIDSRNCRVRDWSVDFSAACVDLGNARRSVDNLSQRSHSNEIASHLNFREHSGESVALDSSLYTKAWIDTTSGVGIKDYHAIERWQSQAAAADSYFSNPTIHLKDEEESNACSRLPSWKRDCMANESSVSQVTVNREASKCHSRGADRIKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKVMEQATDAEKAMAVHEFLDFKRKNKIRSFVDKLIEKYMAVKPDVKS 2004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0135 2004 PANTHER FLAVIN MONOAMINE OXIDASE 934 1421 - -
Prci2g0135 2004 MobiDBLite consensus disorder prediction 1 22 - -
Prci2g0135 2004 Gene3D - 1042 1369 - -
Prci2g0135 2004 MobiDBLite consensus disorder prediction 1654 1685 - -
Prci2g0135 2004 MobiDBLite consensus disorder prediction 560 589 - -
Prci2g0135 2004 Gene3D - 936 1412 IPR036188 -
Prci2g0135 2004 MobiDBLite consensus disorder prediction 1667 1682 - -
Prci2g0135 2004 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1512 1596 IPR035441 -
Prci2g0135 2004 Gene3D - 680 783 IPR036388 -
Prci2g0135 2004 ProSiteProfiles SWIRM domain profile. 681 781 IPR007526 GO:0005515
Prci2g0135 2004 MobiDBLite consensus disorder prediction 1 33 - -
Prci2g0135 2004 SUPERFAMILY Homeodomain-like 681 776 IPR009057 -
Prci2g0135 2004 MobiDBLite consensus disorder prediction 1608 1630 - -
Prci2g0135 2004 SUPERFAMILY FAD-linked reductases, C-terminal domain 1252 1363 - -
Prci2g0135 2004 Pfam SWIRM domain 691 771 IPR007526 GO:0005515
Prci2g0135 2004 PRINTS Adrenodoxin reductase family signature 958 971 - -
Prci2g0135 2004 PRINTS Adrenodoxin reductase family signature 935 957 - -
Prci2g0135 2004 Coils Coil 1427 1447 - -
Prci2g0135 2004 Pfam Flavin containing amine oxidoreductase 944 1414 IPR002937 GO:0016491
Prci2g0135 2004 SUPERFAMILY FAD/NAD(P)-binding domain 933 1417 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0135 Prci-Chr2 1095455 1106468 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Prci2g0135 Amino_oxidase 3.2e-107 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0135 2 1095455 1106468 Prci2g0135 2 1095455 1106468 ECH