Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0077 ATGGCCAAGGCTACGCCCAGTCACACACATACTGTTTCCGGATGGGCTGCTCACGATTCTTCCGGCAAAATTACCCCTTACACTTTTAAACGACGGGAGAACGGCGTTGACGACGTCACTATACGGATCCTGTATTGTGGCATCTGCCACACTGACCTTCACTATGTCAAGAACGACTGGGGCATTACTATGTATCCCGTGGTTCCGGGGCACGAGATCATAGGGGTGATAACGAAGGTGGGGAGCAACGTGAAGGGGTTCAAGGAAGGAGACAGGGCAGGGGTGGGGTGCCTGGCAGCCACGTGCCTGGACTGTGAATACTGTAGGAGCGATCAGGAGAACTACTGCCAACAGTTACAGTTCACATACAACGGTATCTTCTGGGACGGCAGTGTCACCTACGGCGGCTACTCCACCATGATAGTGGCGGATCACAGATACGTGGTGCACGTACCGGAAAACCTGAGGATGGAAGGAGCGGCTCCGCTGCTGTGCGCGGGGATAACGGTGTTCAGTCCGATGAAAGATCACGGGCTGGTGGAGAGCGGGGGGAAGAGGATAGGGGTGGTGGGGCTGGGAGGACTGGGGCATGTGGCGGTGAAATTCGGGAAGGCATTCGGGCACCACGTGACGGTGATCAGCAGGTCGGCGGGGAAGGAGTGGGAGGCGAAGAACAGGCTGGGAGCCGACGAGTTCTTGGTAAGCAGCGACCAGGAGCAGATGGAGGCGGGGAAGAGGACGCTGGATTTCGTACTGGACACGGTGTCAGGGGAGCATTCTCTGTTACCAATCCTGGAACTGCTCAAGGTCAACGGCACACTGTTCATCGTAGGGGCTCCCAACGAGCCCCTCCAGCTGCCGGCTTTCCCTTTGATCTTCGGGAAAAGGACGGTGAAAGGAGGCATCATCGGAGGCATCAGGGAGACGCAGGAAATGCTGGACCTCTGTGGCAAGCACGACATCACGTGCGACGTGGAGTTGATAAGGCCTCATCAGATCAACCAGGCCTTGGATCGCCTCGCCTCCAACAATGTCCGTTACCGTTTCGTCATCGACATCGCTTCTGCCTCTTCCTCTCCTCTTTAA 1086 0.5681 MAKATPSHTHTVSGWAAHDSSGKITPYTFKRRENGVDDVTIRILYCGICHTDLHYVKNDWGITMYPVVPGHEIIGVITKVGSNVKGFKEGDRAGVGCLAATCLDCEYCRSDQENYCQQLQFTYNGIFWDGSVTYGGYSTMIVADHRYVVHVPENLRMEGAAPLLCAGITVFSPMKDHGLVESGGKRIGVVGLGGLGHVAVKFGKAFGHHVTVISRSAGKEWEAKNRLGADEFLVSSDQEQMEAGKRTLDFVLDTVSGEHSLLPILELLKVNGTLFIVGAPNEPLQLPAFPLIFGKRTVKGGIIGGIRETQEMLDLCGKHDITCDVELIRPHQINQALDRLASNNVRYRFVIDIASASSSPL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0077 361 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Prci2g0077 361 SUPERFAMILY GroES-like 17 183 IPR011032 -
Prci2g0077 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Prci2g0077 361 Gene3D - 15 353 - -
Prci2g0077 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Prci2g0077 361 CDD CAD1 14 352 IPR047109 GO:0016616
Prci2g0077 361 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Prci2g0077 361 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491
Prci2g0077 361 Gene3D - 166 323 - -
Prci2g0077 361 FunFam probable cinnamyl alcohol dehydrogenase 15 174 - -
Prci2g0077 361 PANTHER ALDEHYDE REDUCTASE 7 355 IPR047109 GO:0016616
Prci2g0077 361 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0077 Prci-Chr2 641558 643573 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0077 2 641558 643573 Prci2g0077 2 641558 643573 ECH