LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g3040	ATGGAGAGAGCGTGGAAGCATAATACGGAGATATCAGTGTCACCTAATTGCCCAAGAAGGTACTGGACCAAAGGAGGATCCCTCCGCAACGTCCCCGTTGGTGGTGGCTGCCGGAAAACCAGGCGCCATGCTTGCAAGACTTTACTCAGACACTCCGCCTTGCCTTCGCCACATGCTGCTAATCGCCATCCCTCTGCTGTTTCGCCTTCTAGCTCCTCATCACTGCCATCTGATCATGCTCCCCATATTGATCTGGCACTGATTTATGCGAATTTTCTCAATCAAAACCCAGATTCAAGTCATCAGGAGCCACATCATCATCAACTCATGAAAACACTGGGTTTTGATCCTTGCGTAGAGTATTCCAGTCTGTCCGACATAGTTTGGGGTCTCTCGCAACCATCCACGATAGAATCGCATTTTGATGTCGAGAGTCATCTTCTCGGTGGGTTATTTAACTCCATGCAGGATCATAAGGAGGACAGAATAATTGGTACTAGTAGCGATTTTGAACTACCGCCATTACCTGGTGAAGACGTAGCCTCGCAGTATGATATGATGATGTGGTCCGATTCTAATGACGAGACGATGGTCGTAAACCAGGCGACACATGGAAGTGAACCTCATGTTTATTGTAACTGGGGACCTTTTCGTTACCCGACGAATGTTTCTTTTCCCAGCCCTTGA	687	0.4789	MERAWKHNTEISVSPNCPRRYWTKGGSLRNVPVGGGCRKTRRHACKTLLRHSALPSPHAANRHPSAVSPSSSSSLPSDHAPHIDLALIYANFLNQNPDSSHQEPHHHQLMKTLGFDPCVEYSSLSDIVWGLSQPSTIESHFDVESHLLGGLFNSMQDHKEDRIIGTSSDFELPPLPGEDVASQYDMMMWSDSNDETMVVNQATHGSEPHVYCNWGPFRYPTNVSFPSP	228

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g3040	228	MobiDBLite	consensus disorder prediction	52	78	-	-
	Prci1g3040	228	MobiDBLite	consensus disorder prediction	63	78	-	-
	Prci1g3040	228	Pfam	Dof domain, zinc finger	17	42	IPR003851	GO:0003677\|GO:0006355
	Prci1g3040	228	PANTHER	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	19	126	IPR045174	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g3040	Prci-Chr1	48992215	48993160	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g3040	19	192	C2C2-Dof Transcription Factor Family	AT3G52440	33.908	2.40e-19	82.4

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2C2-Dof	Prci1g3040		zf-Dof	5e-08	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g3040	-		-	pcin:129303526	473.011