Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci1g2289 | ATGGAAGGACAAAGTGACCAAGAGAACCCTCCGAAGATGATGCCTTCCAACTCTAGAGGAAGTGGTGAGGATTCCGCCACAGCTGATGGAAAAATTGGGAATGGAAGCCAGGGGACCTGCCTCCCAGAACCATTTCATAACTATGTGGAGTATCTCACAGAAGCCTCACCATATCTGCCAAATACTACCGCCGAGTATGTACTTGGCAGCTGTTATCCTCCTGTTGGTAGCTTACACGATGTTAATGGGGTCAATGGAACAGACAGGAACTTCTTTTATAATGATCCAGGAAAAGCATGCTGTTTTAAAGCTCCTGATTCTTCTGCTGGCATAGACTTTAGGAAGGTGGGTTTTTGGAGACCAAATAGTGAAGGCCACCAATCGAAGAAATTCGCAACTAACCAACCCGACCATCATTCTGAGCAGAGCCAAGCTCCGTGGAAAGCAGAATCAACTGGAGATAAGCATTCTGCTTCAAAACTTGATCGAAGGGTAACAGGAGGTGAACCTGGTTTCCTTCCCAAATCACGAAGTAGTTCATCAAAACAGAAAGCCATGGCAGCTGACCGTCAACGCAGGCAACGTATTGCTGATAACCTTAAAGCTTTGCACGACTTGCTACCGGCTCCAGCAGAGGGTTGCTCGACATATATACTGGATGACATCATTGACTATGTCAAATATTTGCAGCTTCAGATAAAGGTATTAAGTGGAAGTAGATTGCAAGGCGAATCACCTGCCATGCCACTCACATTCCGTGAGGGTTATGGCCACTATATTAGCCAGCAGATGCTGAATGAACCTCTTGAGGAGATGATGGGAAAACTGGTTGAGGAAAATCCAGCAGCAGCAGCTCAGCTGTTAGAGAGCAAGGGCCTTTATCTGTTGCCTTTGACCTTGGTTGAAGACTTACGCCAAGCTATGCAGATGTTTGGCGGGAATCCACGTGTCTAA | 954 | 0.4644 | MEGQSDQENPPKMMPSNSRGSGEDSATADGKIGNGSQGTCLPEPFHNYVEYLTEASPYLPNTTAEYVLGSCYPPVGSLHDVNGVNGTDRNFFYNDPGKACCFKAPDSSAGIDFRKVGFWRPNSEGHQSKKFATNQPDHHSEQSQAPWKAESTGDKHSASKLDRRVTGGEPGFLPKSRSSSSKQKAMAADRQRRQRIADNLKALHDLLPAPAEGCSTYILDDIIDYVKYLQLQIKVLSGSRLQGESPAMPLTFREGYGHYISQQMLNEPLEEMMGKLVEENPAAAAQLLESKGLYLLPLTLVEDLRQAMQMFGGNPRV | 317 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci1g2289 | 317 | MobiDBLite | consensus disorder prediction | 124 | 192 | - | - | |
Prci1g2289 | 317 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 180 | 229 | IPR011598 | GO:0046983 | |
Prci1g2289 | 317 | Gene3D | - | 174 | 242 | IPR036638 | GO:0046983 | |
Prci1g2289 | 317 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 48 | 300 | - | - | |
Prci1g2289 | 317 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Prci1g2289 | 317 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Prci1g2289 | 317 | CDD | bHLH_AtbHLH_like | 186 | 237 | IPR045239 | - | |
Prci1g2289 | 317 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 177 | 243 | IPR036638 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci1g2289 | Prci-Chr1 | 43472499 | 43476207 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci1g2289 | 166 | 307 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT2G24260 | 36.646 | 3.28e-21 | 89.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Prci1g2289 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci1g2289 | - | - | gmx:100788949 | 323.939 |