Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1906 ATGGCCACGGTAGATGAACCTCTGTATCCGATAACTGTTTTGATTGATGAGTTAAAGAACGACGATATCCACCTTAGGCTAAACTCGATTCGCAAACTTTCCACAATTGCACGTGTACTTGGGGAGGAAAGGACCAGGAAGGAATTGATTCCCTTTCTCAGTGAGAACAATGACGATGATGATGAGGTTCTTCTAGCAATGGCAGAGGAGTTGGGGGCTTTTGTCCCATATGTTGGAGGCGTAGAACATGCCAATGTGCTACTCTCTCCATTAGAAGCTCTCTGCACGGTTGAGGAAACTTGCGTAAGGGACAAAGCAGTGGAGTCACTATGTAGAATTGGAGCTCGAATGAGAGAAAAAGACTTGGTCGAGTACTTTATTCCTCTGGTAAAGAGACTGGCTGCTGGTGAGTGGTTCACAGCTCGAGTTTCCTCGTGCGGCTTGTTTCATATGGCTTACCCTAGTGCACCAGAGGCCTTAAAAACTGAGCTGAGAACTTTGTACGGTCAACTGTGTCAAGATGATCTGCCTATGGTCAGGAGATCGGCTGCAACAAACCTGGGAAAATTTGCTGCCACTGTGGAAGTTACTCATCTGAAAACCAACATCATGCCCATATTTGAGGACCTCACACAAGATGAACAGGATTCTGTTCGGTTACTTGCTGTTGAAGGCTGCGCGGCTCTTGGGAAATTGTTGGATCCTCAAGATAGTGTGTCACTTATTCTTCCTATCATGGTTAATTTCTCCCAGGATAAGTCATGGCGTGTTCGTTACATGGTTGCCAATCAACTAAATGAGCTCTGCGAAGCTGTTGGTCCTGAGTCCACCGGGTCAGACTTGGTTCCTGCATATGTTCGGCTGCTGCGTGATCATGAGGCTGAAGTACGCATTGCTGCTGCTGGAAAAGTTACAAAGTTTTCTCACGTATTAAATCCAGAACTCGCTATCCAGCATATTCTACCATGTGTGAAAGAGTTATCAACTGACTCATCTCAACATGTTCGCTCTGCGTTGGCTTCAGTTATAATGGGAATGGCGCCAGTTTTAGGGAAGGATGCAACAATTGAGCAGCTTCTGCCTATTTTCCTTTCACTTTTGAAAGATGAGTTTCCTGATGTCAGGCTGAACATTATTAGCAAGCTTGATCAAGTGAACCAGGTAATTGGCATTGATCTATTATCTCAGTCTCTATTACCAGCTATAGTTGAGCTTGCTGAGGATCGCCACTGGAGAGTTAGACTTGCAATCATTGAATATATACCCTTATTGGCTAGTCAGTTGGGTGTGGAATTTTTTGATGACAAGCTTGGAGCTCTTTGCATGCAATGGCTAAAGGACAAGGTCTACTCAATTCGGGATGCTGCTACTAATAATGTGAAACGCTTAGCAGAAGAATTCGGACCAGATTGGGCAATGCAGCATATTATTCCTCAGGTTTTGGACATGGTTAACGATCCAAACTGTCTGTATCGAATGACCATTCTTCATGCAATCTCTCTTCTAGCCCCTGTTCTGGGTTCAGAGATTACTTCTTCGAAACTGCTCCCTCTGGTCATAAATGCATCGAAAGATAGTTTGTCTTGCAGGGTACCCAATATCAAATTCAATGTAGCTAAAGTTCTTCAGTCCATCATTCCGATTGTAAATCAGTCTGTGGTTGAGAATACTATCCGTCCCTGTTTGGCTGAACTCAGCGAGGATCCTGATGTTGATGTTAGGTTTTTTGCCACCCAAGCACTACAATCTAATCATCAAGCCGGCAAGTCCAGCTAG 1776 0.4443 MATVDEPLYPITVLIDELKNDDIHLRLNSIRKLSTIARVLGEERTRKELIPFLSENNDDDDEVLLAMAEELGAFVPYVGGVEHANVLLSPLEALCTVEETCVRDKAVESLCRIGARMREKDLVEYFIPLVKRLAAGEWFTARVSSCGLFHMAYPSAPEALKTELRTLYGQLCQDDLPMVRRSAATNLGKFAATVEVTHLKTNIMPIFEDLTQDEQDSVRLLAVEGCAALGKLLDPQDSVSLILPIMVNFSQDKSWRVRYMVANQLNELCEAVGPESTGSDLVPAYVRLLRDHEAEVRIAAAGKVTKFSHVLNPELAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVEFFDDKLGALCMQWLKDKVYSIRDAATNNVKRLAEEFGPDWAMQHIIPQVLDMVNDPNCLYRMTILHAISLLAPVLGSEITSSKLLPLVINASKDSLSCRVPNIKFNVAKVLQSIIPIVNQSVVENTIRPCLAELSEDPDVDVRFFATQALQSNHQAGKSS 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1906 591 ProSiteProfiles HEAT repeat profile. 476 514 IPR021133 -
Prci1g1906 591 ProSiteProfiles HEAT repeat profile. 558 591 IPR021133 -
Prci1g1906 591 Gene3D - 2 583 IPR011989 -
Prci1g1906 591 ProSiteProfiles HEAT repeat profile. 398 436 IPR021133 -
Prci1g1906 591 ProSiteProfiles HEAT repeat profile. 10 48 IPR021133 -
Prci1g1906 591 Pfam HEAT repeat 242 270 IPR000357 GO:0005515
Prci1g1906 591 SUPERFAMILY ARM repeat 8 583 IPR016024 -
Prci1g1906 591 FunFam Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform 2 585 - -
Prci1g1906 591 ProSiteProfiles HEAT repeat profile. 281 319 IPR021133 -
Prci1g1906 591 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 3 584 - -
Prci1g1906 591 Pfam HEAT repeats 361 459 - -
Prci1g1906 591 ProSiteProfiles HEAT repeat profile. 320 358 IPR021133 -
Prci1g1906 591 ProSiteProfiles HEAT repeat profile. 515 557 IPR021133 -
Prci1g1906 591 ProSiteProfiles HEAT repeat profile. 242 280 IPR021133 -
Prci1g1906 591 ProSiteProfiles HEAT repeat profile. 203 241 IPR021133 -
Prci1g1906 591 ProSiteProfiles HEAT repeat profile. 359 397 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1906 Prci-Chr1 39828132 39835685 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g1906 1 39828132 39835685 Prci1g1906 1 39828132 39835685 ECH