LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g1829	ATGTCGCTCCACGGCGGACCTACCGACCGCCGGGAAGCTGGCTCGCCGGCAGCCGGGAATGCTGTCTCTGGTGGTGGAAATGGAGTCCTCACAAGCGACTCTAGCAGGCCAGCGACGGTAGTTTCGAGCCAGAGGCTGCGGTTGAATCCGAACAAGGACCACAAGCCAGATATTTACGAAGGTTTGCAGTTGGAATTCAGTCCTTCGATTTTTAGCTCGCTGGAGAGGTATATGCCTCCTAGCATGCTCGGTGTGCCTCGGGAAGATAAAGTAAACTTCATGCGGGAGATTTTGCTCAGGTATCTGCCCCCGGGAGAGCAGAACAGGGCTCAGAAGCATAGAGATTACAGACAAAAGATAATATCAAATTATCAGCCTTTACACTGTGAGTTGTATGCTTTGAACCCTACAATGTTCTTCGTCCCAGCATTTCTGAAAGCAATCAATGATAATACAGAGCAAAGCTTTAGAAGTATAATGTCTGAGCCCATTCCAGGCATTTTCACATTTGAAATGCTACAGCCTCCCTTCTGTGAGTTATTGTTATCTGAGATTGAAAATTTTGAGAAGTGGGTGAATGAAACAAAATTTCGAATCATGCGTCCTAACACGATGAATAAATATGGTGCTGTACTTGATGATTTTGGCCTTGAAACGATGCTTGACAAGCTCATGGAAGGTTTTATTCGTCCTATATCTAAAGTCTTCTTTGGAGAAGTTGGTGGAGCAACCCTAGATTCTCATCATGGATTTGTTGTTGAATATGGTAAAGAAAGAGATGTTGACTCAGGTTTTCATGTGGATGACTCAGAAGTAACCTTGAATGTTTGCTTGGGTAAGGAATTTTCTGGAGGGGAGTTATTTTTTCGAGGAACGCGATGTGATAGGCATGTAAATACAGGGAGCCAGTCAGAGGAGATATTTGACTACTCTCATGTCCCTGGACGAGCTGTGCTTCATCGTGGTCGGCATCGCCATGGTGCTAGAGCTACTACGTCTGGTCATCGGATCAACCTACTTCTATGGTGCAGAAGTTCTGTCTTCAGAGAGATGAAAAGGTATCAAAAAGATTTCTCCAGCTGGTGTGGTGAGTGCAATCGTGAGAAGAAGGCAAGGCAGCATTCATCAATTGCCGCTACAAAATTGGAACTGTTCAAGAGAGAAGAGACCACCACATAA	1179	0.4521	MSLHGGPTDRREAGSPAAGNAVSGGGNGVLTSDSSRPATVVSSQRLRLNPNKDHKPDIYEGLQLEFSPSIFSSLERYMPPSMLGVPREDKVNFMREILLRYLPPGEQNRAQKHRDYRQKIISNYQPLHCELYALNPTMFFVPAFLKAINDNTEQSFRSIMSEPIPGIFTFEMLQPPFCELLLSEIENFEKWVNETKFRIMRPNTMNKYGAVLDDFGLETMLDKLMEGFIRPISKVFFGEVGGATLDSHHGFVVEYGKERDVDSGFHVDDSEVTLNVCLGKEFSGGELFFRGTRCDRHVNTGSQSEEIFDYSHVPGRAVLHRGRHRHGARATTSGHRINLLLWCRSSVFREMKRYQKDFSSWCGECNREKKARQHSSIAATKLELFKREETTT	392

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g1829	392	Gene3D	q2cbj1_9rhob like domain	170	345	-	-
	Prci1g1829	392	PANTHER	2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2	39	382	-	-
	Prci1g1829	392	SMART	p4hc	165	344	IPR006620	GO:0005506\|GO:0016705\|GO:0031418
	Prci1g1829	392	MobiDBLite	consensus disorder prediction	1	54	-	-
	Prci1g1829	392	MobiDBLite	consensus disorder prediction	25	47	-	-
	Prci1g1829	392	ProSiteProfiles	Fe(2+) 2-oxoglutarate dioxygenase domain profile.	246	345	IPR005123	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g1829	Prci-Chr1	38643598	38651413	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Prci1g1829	1	38643598	38651413	Prci1g1829	1	38643598	38651413	ECH