Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0461 ATGCGCGCGTGCTTAGAGATGGTAGAGAGAAAGAGAGCGGTGATGATACGTTGTTGTTCCCCTAGTTATAATAAACTCATGAGCTTAGTCACTGTAGTGTGTTTTGTTGCGCTGATTCTGTTGATCTCGGCTGGGACCATCGAGTTTCCTTCATCGTCCTATTTCTATTCATTACCTTCATTCACCACTACCATCATCAATTACAATGCTTCCATGTCTGATCATCATCATGAGGGATTCACAGATCTTCTTGGTGCCTTTAAGGAGTGGGATTCTCAAGTGGGTTGCGAGAGGTATAAGAAGAAACTACTGTTGCAGAATTATACTGCCGTGAATTCTTCTTTGAGGGAAGAGATTCATGGAGGTGGTGCATCAGATTCAGATGAAGAGTGTGAGGGGTTGAAGATGAAGCATGTGAGTGTATTGGTGAAAGGGCCAACCTGGATTCCTGATAGTCTGGATAACTTGTACACTTGTCGATGTGGTTTGAGCTGCTTGTGGACTAAATCTTCTGTCCTTGCAGACAATCCTGATGCTCTCTTGTTTGAAAAAACTAAGCCTCCACGTCGGAGGAAGGTTGGGGAACCAATTCGAGTATACATGGATCTAGAACCAGAGAGGAAAAGAACAGGTCGTGAGGACATATTCATCAGTTATCATGCTGATGATGATATCCAGACAACCTATGCCGGAGCCTTTTTCCACAACAATCGAAACTACCACGTTTCCTCTCACAAGAACAGCGGACCACTTGTGTACTGGTCATCATCGCACTGTGTATCCAAAAGGAACAAGGTGGCGCAAGGGCTTCTCTCCATGCTGCCTCACCATTCCTTCGGCAAGTGCCTCAACAACGTTAATGGCAGAAACAAGGTCCTCTCTTTCTACCCTCACTGCACTCAATCCTCTTCCCCAAGATGGTGGGACCACCTTCACTGTGCCATGTCACACTACAAGTTCGTCCTCGCCATTGAGAACACCTGGACTAACAGCTACGTCACCGAGAAGCTCTTCTACGCCCTTGACTCTGCTGCCATCCCCATCTACTTCGGAGCTCCCAACATCGATGACTTTGTACCGCCTCATTCCGTCATCGACGGCTCTAAGTTCACGACGCTGCAAGATTTGGCTCTCTATGTCAAGGCTTTGGCTAATGACTCTGTGGCTTACGCGGAGTATCATGCTTGGAGAAGGTGTGGCCTCTTGGGCAACTATGCCATGACCAGAGGGCTTAGCCTTGACTCTTTGCCTTGTAGGCTTTGTGAACTTATTAGCAGAAAAGGAGGAAGAAATGCAGATTCCAATTGA 1308 0.4687 MRACLEMVERKRAVMIRCCSPSYNKLMSLVTVVCFVALILLISAGTIEFPSSSYFYSLPSFTTTIINYNASMSDHHHEGFTDLLGAFKEWDSQVGCERYKKKLLLQNYTAVNSSLREEIHGGGASDSDEECEGLKMKHVSVLVKGPTWIPDSLDNLYTCRCGLSCLWTKSSVLADNPDALLFEKTKPPRRRKVGEPIRVYMDLEPERKRTGREDIFISYHADDDIQTTYAGAFFHNNRNYHVSSHKNSGPLVYWSSSHCVSKRNKVAQGLLSMLPHHSFGKCLNNVNGRNKVLSFYPHCTQSSSPRWWDHLHCAMSHYKFVLAIENTWTNSYVTEKLFYALDSAAIPIYFGAPNIDDFVPPHSVIDGSKFTTLQDLALYVKALANDSVAYAEYHAWRRCGLLGNYAMTRGLSLDSLPCRLCELISRKGGRNADSN 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0461 435 FunFam Alpha-(1,4)-fucosyltransferase 198 402 - -
Prci1g0461 435 Gene3D - 200 400 IPR038577 -
Prci1g0461 435 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 131 427 - -
Prci1g0461 435 PIRSF FucT_plant 19 435 IPR017177 -
Prci1g0461 435 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 251 427 IPR001503 GO:0006486|GO:0008417|GO:0016020
Prci1g0461 435 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 136 426 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0461 Prci-Chr1 4323836 4328610 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0461 32 432 Xyloglucan Fucosyltransferase1 AT1G71990 60.741 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0461 K14412 - vvi:100256631 541.576