Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1732g0003 ATGATGAAGAGCCATACCCAGTTTCCATTGGGCCTCGCGCTCTTCAGCGTTGTCTGCCTCGTCCAAACCAAATCCATCATCGAACCATGCGTCTCCTCAGACTCCTGCTTTTCCCTCCTCTCCTTCGTCCTACCCTGGGACTCCAAGCTATCCGAAATCGCCTCGCGCTTTCAGGTCAATGTCTCCGACATCCTCGCCGCCAACTCCGTCTTCCCGATGTCACAGAAACTCGCCGATCAGATCATCAGATCCAAATCCATCGTGAAGATCCCCATCTCGTGCCCTTGTGTCGACGGAATCCGGAGATCTATGTCCACAATCTACACCGTGCAGGCATCGGACACACTGGAGAACATATCGGAGGGATTCGGCCGGCTGGTGAGCGCGGACCAGATAGCGAGCGTGAACAGCATCAATGCGACGAATCGTTTGACGAACGGAGGGAAGTTGGTGATTCCGTTGCCGTGTACGTGCTTCAATAACGTGAGGAATGGCGAAACGACGGTGTATATGTCGTATGCGGTGAGCGAGGGGGAGAGCTTGAGGAGTATAGCGTCGGGTTCGAAAACGACAGTGTCGGATTTGGAGGCAATCAATGGACTGAGTCAGGACGCGGTCGAACCGGGAGATATAATAGCTATTCCCATTGCAGCTTGTTCATCAGCAAGCCTGAATTGGTACAACGAGAGTCTCATCGTCCCAAATGGCTCATATGCTCTTACTGCCACAGACTGCATCAAATGCTCTTGTGGCCCCATCGATCTCAGGCTGCAATGTTATCCATCTGGTCTGGAAGCTCCCTGCTTCAATTTACAGTGCAAAGATTCCAATCTTGTAATTGGAGACCAACATGTCACTTATTTCAAATCTGGCTGCAATGTCACCCAGTGTGTCTATCGTGGCCACAGAGGTGGTAAGATTCTAAGAAGCGTGTCGGAATCTTCTTATCTGAGGTGCCCCGCGAATCAGACTTACAATGCAGCGTCGCCTTGGCCATCAATAAATTTAGATCCCGTAATGCCGTTTGGGGCATTTTCCCCATCTCCGTCACCTAGTCCAGTTTCTGATGCTTTAGTGCACGCCACTCAAGTTTCCATCATGTTGCTCCCACTGCTTCTTTGGATATTAATCAACACGTGA 1140 0.5088 MMKSHTQFPLGLALFSVVCLVQTKSIIEPCVSSDSCFSLLSFVLPWDSKLSEIASRFQVNVSDILAANSVFPMSQKLADQIIRSKSIVKIPISCPCVDGIRRSMSTIYTVQASDTLENISEGFGRLVSADQIASVNSINATNRLTNGGKLVIPLPCTCFNNVRNGETTVYMSYAVSEGESLRSIASGSKTTVSDLEAINGLSQDAVEPGDIIAIPIAACSSASLNWYNESLIVPNGSYALTATDCIKCSCGPIDLRLQCYPSGLEAPCFNLQCKDSNLVIGDQHVTYFKSGCNVTQCVYRGHRGGKILRSVSESSYLRCPANQTYNAASPWPSINLDPVMPFGAFSPSPSPSPVSDALVHATQVSIMLLPLLLWILINT 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1732g0003 379 Pfam LysM domain 173 215 IPR018392 -
Prci1732g0003 379 Pfam LysM domain 50 91 IPR018392 -
Prci1732g0003 379 Pfam LysM domain 108 153 IPR018392 -
Prci1732g0003 379 CDD LysM 172 214 IPR018392 -
Prci1732g0003 379 Gene3D LysM domain 102 161 IPR036779 -
Prci1732g0003 379 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 6 323 - -
Prci1732g0003 379 SUPERFAMILY LysM domain 171 215 IPR036779 -
Prci1732g0003 379 SUPERFAMILY LysM domain 106 154 IPR036779 -
Prci1732g0003 379 CDD LysM 106 152 IPR018392 -
Prci1732g0003 379 ProSiteProfiles LysM domain profile. 106 152 IPR018392 -
Prci1732g0003 379 SMART LysM_2 107 153 IPR018392 -
Prci1732g0003 379 SMART LysM_2 50 91 IPR018392 -
Prci1732g0003 379 SMART LysM_2 172 215 IPR018392 -
Prci1732g0003 379 Gene3D LysM domain 162 225 IPR036779 -
Prci1732g0003 379 ProSiteProfiles LysM domain profile. 171 214 IPR018392 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1732g0003 24 351 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 43.333 2.40e-81 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1732g0003 - - aprc:113855794 441.425