Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0348 ATGGCAATAATGCAGTACTCCTCGGGGAGGTTCAAACCCAACATTGATGTAGCTCCCTTTTGCCCTCGTCGTGCCTCCTCCAACACCAAGTTCTGTTACTTCAACAACTACAGCGTCTCCCAGCCCAGGTACTTCTGTAAACCCTACCGCCGCTACTGGACTAGAGGCGGCTCTCTCCTCAATGTCTCCGTCGGCGACGCTTCCCGTAAGTCCCACCCTACCAAACCCTCTCTCCATTCCCCTTGTCCTGCACGCCTTTCCTTCAGCGTCATTTCTTGTTCTCAGGACCTGAATCCAGAGCTTCCCATATTGACATGGCCCTCTTGTTCGCCAAGATTTTTAACCATGACACCACCTCCCCCTGAGAATTCCATCACCAGCCCGTGA 387 0.5323 MAIMQYSSGRFKPNIDVAPFCPRRASSNTKFCYFNNYSVSQPRYFCKPYRRYWTRGGSLLNVSVGDASRKSHPTKPSLHSPCPARLSFSVISCSQDLNPELPILTWPSCSPRFLTMTPPPPENSITSP 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0348 128 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 18 75 IPR045174 GO:0003700|GO:0006355
Prci15g0348 128 Pfam Dof domain, zinc finger 20 72 IPR003851 GO:0003677|GO:0006355
Prci15g0348 128 ProSiteProfiles Zinc finger Dof-type profile. 19 73 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0348 Prci-Chr15 2307157 2307543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0348 17 79 C2C2-Dof Transcription Factor Family AT1G21340 65.079 2.06e-23 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci15g0348 zf-Dof 2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0348 - - pcin:129294552 277.33