Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0943 ATGGTCTTCTCTTCCCTTCCTTCACCCTATCATCTAGATCCACCACCCAACTGGCCTCACCAGCAACTTGATCATCAGCAGCAAGGAGTGATTCATACCCAGAATTCCCATGTTCCGGGTCCACCGCTGGCTGCGTCGCCGCCACCGATTGCTGCTGCCATTGGAAGCGGTGATGGTGGCGGCAACAAAGGCTCAACAAGACCGGGATCCATGGCAGATCGAGCTAGGCTAGCGAAGATAGGACAACCAGAAGCAGCACTGAAATGTCCACGATGTGAATCAACCAACACCAAGTTCTGTTACTATAACAATTACAGCCTCTCTCAGCCTCGCCACTTCTGCAAGACTTGCCGGCGATACTGGACCCGAGGTGGCGCGTTGAGGAACGTCCCGGTAGGAGGTGGTTGCAGAAGGAAGAACAAGAGAAGCAAAGGAACTAACAGTAGATCATCAAAATCTCCAAACAAAACAGCAGCCACATCATCAGGTCATCACTTATTACCATCTCCATTACTCTTCCCTCCAATAACAACATCTCAAAGCTACAATGACTACGACGTCGTTTTTGACTCATCAAACATCAAAGATGCTGAATTTCAAATTGGTTGTAATTCTGCTATTATCTCAGGTGGTATAATTGGCGGTTATAATAACAACAGCTTCATAACTACAGAGCAATGGAAGCTACCAAGTCTTCAGCATCATCAACAGTTTCCAGCAACAACATTCTTGACTAATTTGGAAGCACCAGTAGGGTTATATCAGTTTGAAAGATCAGAAAATGTTGAGATCGAACCTCCAAGGACATTATTATATTCTGGAAATATAGGTAGCGATCATCATCATCAGCATCAACTTAGTAGTACAGTTAAATTGGAGGAAAACATGGATCAAGTGGTGGGATTATCAAAGAGTTTTATGGGTAACTCATCAGAAAATAACAATGAACAATTCTGGGAAGCAAATAATGGAAGTGCATGGAATAGTAGTAATGTTTCTATTAGTTTCGCTTCTTCTTCTTCCACCACCCATCTCCTGTGA 1041 0.44 MVFSSLPSPYHLDPPPNWPHQQLDHQQQGVIHTQNSHVPGPPLAASPPPIAAAIGSGDGGGNKGSTRPGSMADRARLAKIGQPEAALKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRKNKRSKGTNSRSSKSPNKTAATSSGHHLLPSPLLFPPITTSQSYNDYDVVFDSSNIKDAEFQIGCNSAIISGGIIGGYNNNSFITTEQWKLPSLQHHQQFPATTFLTNLEAPVGLYQFERSENVEIEPPRTLLYSGNIGSDHHHQHQLSSTVKLEENMDQVVGLSKSFMGNSSENNNEQFWEANNGSAWNSSNVSISFASSSSTTHLL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0943 346 Pfam Dof domain, zinc finger 86 141 IPR003851 GO:0003677|GO:0006355
Prci14g0943 346 ProSitePatterns Zinc finger Dof-type signature. 89 125 IPR003851 GO:0003677|GO:0006355
Prci14g0943 346 MobiDBLite consensus disorder prediction 147 164 - -
Prci14g0943 346 MobiDBLite consensus disorder prediction 1 70 - -
Prci14g0943 346 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 75 281 IPR045174 GO:0003700|GO:0006355
Prci14g0943 346 MobiDBLite consensus disorder prediction 131 166 - -
Prci14g0943 346 ProSiteProfiles Zinc finger Dof-type profile. 87 141 IPR003851 GO:0003677|GO:0006355
Prci14g0943 346 MobiDBLite consensus disorder prediction 20 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0943 Prci-Chr14 8440104 8441809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0943 25 345 C2C2-Dof Transcription Factor Family AT3G55370 36.337 1.16e-47 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci14g0943 zf-Dof 3.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0943 - - pcin:129293462 622.468