Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0032 ATGGGCGGCCTTCCTCGGCTGTTCCTGGTAATCATATTCGGTGCCGCCGCCGCATCATGGGTGGTGGAGGCTCAGCCACAGGCGAGATTCAAATGCAGCTCGGAAGGCAAAACATGTCGTTCCCTTGTGGATTACTCGTCCCCAAATGAAACCACTTTAGGCCACATTCAAAAGCTCTTCAACTTGAAGCACGTTCTGGACATAGTGGGCGCTAACGCCTTCCCCTCGACCACCCGAGGCAACCGCACCGTCGGCAAGGGTCAAATTATTAAAATTCCCTTTCAGTGCCGGTGCGCCAACGGCACCGGCTTGTCCAACAAGACGCCTCTCTATACCATCCGGAAAGATGACACGCTTTCCCACATAGCCATGGGGGTGTTCTCGGGTTTGGTCACTTACCAGCAGCTCCAAGCGCTCAACAACATACCCGACGCTACGCTAATTCAGCCCGGCCAGAAGGTGTGGATCCCTCTCCCCTGCAGCTGCGATCAGGTGGACGCCACGGATGCCGTCCACTATGGACATCTCGTGGCTCGCGGCAGCTCCTTTCAGCAGATTGCTTTACAGTACGGCACCACCCAGGACGCCCTTCTCGATCTCAACAACATTTCTGATCCCAAGTCCCTTCAAGCCGGTCAAATAATCGATGTTCCTCTCAAAGCTTGTTCCTCCTCGACGGTGAAAAATGACTCCTTGGACTATCCTCTGCTCGTTGCAAAAGGCATGGACACCTACACTGCCAATGGTTGCGTCAAGTGCAGCTGTAACAACGCCGCCGATAACGCCACATTACAATGCGAGCCATCCCAAGTTAAGCCATATAAATGGGATACATGCCCGTCTATGCTATGCGGCAATTCAACCATTGGCAACGTCACTTCTGCAGCTTCCTGCACTCGCACCATCTGTGCTTACGCTGGTTATAACAACCAGACTATTTCCACTGCTCTTTCCAACGAGTCCACTTGTTCTGCACCAACAGGATCAGGAGCGTCGAGAAACAGCTTGCAAGGATGGGGTTGGAATCATCTTTTGATGCCTCTTTATTTTCTTTTCTGTCTATCTTTTCTAGTGAATTCAAATGCCACGTGTCCGTAG 1098 0.5219 MGGLPRLFLVIIFGAAAASWVVEAQPQARFKCSSEGKTCRSLVDYSSPNETTLGHIQKLFNLKHVLDIVGANAFPSTTRGNRTVGKGQIIKIPFQCRCANGTGLSNKTPLYTIRKDDTLSHIAMGVFSGLVTYQQLQALNNIPDATLIQPGQKVWIPLPCSCDQVDATDAVHYGHLVARGSSFQQIALQYGTTQDALLDLNNISDPKSLQAGQIIDVPLKACSSSTVKNDSLDYPLLVAKGMDTYTANGCVKCSCNNAADNATLQCEPSQVKPYKWDTCPSMLCGNSTIGNVTSAASCTRTICAYAGYNNQTISTALSNESTCSAPTGSGASRNSLQGWGWNHLLMPLYFLFCLSFLVNSNATCP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0032 365 CDD LysM 111 156 IPR018392 -
Prci14g0032 365 Gene3D LysM domain 105 164 IPR036779 -
Prci14g0032 365 Pfam LysM domain 176 218 IPR018392 -
Prci14g0032 365 Pfam LysM domain 111 157 IPR018392 -
Prci14g0032 365 ProSiteProfiles LysM domain profile. 109 156 IPR018392 -
Prci14g0032 365 SUPERFAMILY LysM domain 110 158 IPR036779 -
Prci14g0032 365 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 6 326 - -
Prci14g0032 365 CDD LysM 175 217 IPR018392 -
Prci14g0032 365 Gene3D LysM domain 165 231 IPR036779 -
Prci14g0032 365 ProSiteProfiles LysM domain profile. 173 217 IPR018392 -
Prci14g0032 365 SMART LysM_2 110 157 IPR018392 -
Prci14g0032 365 SMART LysM_2 174 218 IPR018392 -
Prci14g0032 365 SUPERFAMILY LysM domain 174 218 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0032 Prci-Chr14 403246 405314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0032 22 318 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 48.161 7.29e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0032 - - lang:109351135 379.793