Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1145 ATGGATAAAACTAAGTCAAATACATTCAAGGGATTCAGAACATTCTTGGTGGTGGGTTTCATTGCTTTTCCCATTTTAGTCATAGTTACTCTAATAAACCAACACTCAATGTCTGATCTCGTTGAGGAAGTTCCGAAAACTAACTTGCTGGGTGGAAGAGTCCATAACAATTCTGCGAATATCTTAAAGGAAGCTGAAGATGTTAGTATTACTGTAACCCCTCAAGCAAGGGGAGGAAAAGTCCAGAATATTACAGGATCAGAGGTAGTTAACGACAAGATGTTAGAACAAAAGGCTCACAATGATTCACCTGCGGCCTCTGAAGAAATCAGCCTAAAAAATAGAACCTCAGATGCTGGTCAGAAGAATCAGTTGATTGCAAATGTGAGTAATGATTCATCTCTATCTGATACTGTTAACAATGATAAACTCCTCAATGAACTTCTAGCTCCCACTTTTGATGAAGGATCATGCCTGAGTAGATATCAGTCTTCCTTATATCAGAAAGCATCTCCTCACAAACCCTCACCATATCTGAAATTCAAGCTACGCAACTATGAACAGCTTCATAGAGGTTGTGGACCCCTTTCCAAATTCTTTGATAAAGTCATGAAAATGGGCAAAAAATCTAGCAAAAATATTGCGGCTACAAAGTGTAAATACCTTGTTTGGACAGCTGCCAATGGCTTGGGGAATAGGATGATAACCTTGGCTGCAGCATTCCTTTATGCTATGCTCACAGATCGAGTTCTACTTGTCAGATTTGGGTCTGATATGGTTGGTCTTTATTGTGAGCCATTTCCTGATTCATCATGGTTATTGCCCCAGAATTTTCCTCGTCGCAAAGAACAGAAACATATTGAAAGCTATGAAAGCTTGTTAAACAAGACGCATGGTTCAAATGTGATTTGGCCATCATTTCTAGTTCTCAATCTACAACACACCCATGATGGTCATAATAATTTTTTTCATTGTGATCATAGCCAAAGTCTTCTCCAGAAAATTCCTGTTCTGATTTTGAAGTCAGATCAATATTTTTCCCCTTCTCTTTTCATGATTCCATCTTTTGGGCAAGAGCTAAGCAAAATGTTCCCAGTAAAAGACACAGTTTTCCACCATCTGGGACGCTACCTTTTTCACCCATCGAATGAGGTATGGGATGCTATTAGCAGGTTCTACAAAGCCCACTTGGCCAAGGCAAATGAGAAGATTGGCCTCCAAGTAAGAATATATAATACTCATCGAGCTCCACATGAAACCATCATTGATGAAATATTAGCCTGTGCCTTCAAGCATAACCTGCTGCCTCAACTGGACCATCGGAAGTCAGTAATATCTCCATCGAAGAACAACACCTCAAAAGCTGTTCTAGTTGCATCTTTATACCCTGAATATGGTGAGAAGCTAAGGGCTTTGTATTTGAGCAACACAACTGTGACTGGGGAAGTTGTAAGAGTTTATCAACCAAGTCATGAAGGGCATCAAAAGTCGAATGATAATGCACACAACATCAAGGCATGGACTGAAATATATTTGCTGAGTTTGTGTGATGCATTGATCACTAGCCCCAAGTCTACTTTTGGGTATGTTGCTCAAAGTCTTGGAGGTTTGAAGCCATGGATTCTGCAGAGAGCATATCATAAACAGATCCCTGATCCACCATGTGTACAAGCTGTATCCATGGAACCTTGTTTGCACTATCCACCTAAACATGATTGTAAAGCCAACAACATAGTGAAATTTACTTCCCTTTTTCCACATATTATGCATTGTGAAGATGTAAGTAATGGATTAAAGCTGGTTGATGATCATATTCATCAGTCGGTAACAAACTCTTGA 1839 0.3953 MDKTKSNTFKGFRTFLVVGFIAFPILVIVTLINQHSMSDLVEEVPKTNLLGGRVHNNSANILKEAEDVSITVTPQARGGKVQNITGSEVVNDKMLEQKAHNDSPAASEEISLKNRTSDAGQKNQLIANVSNDSSLSDTVNNDKLLNELLAPTFDEGSCLSRYQSSLYQKASPHKPSPYLKFKLRNYEQLHRGCGPLSKFFDKVMKMGKKSSKNIAATKCKYLVWTAANGLGNRMITLAAAFLYAMLTDRVLLVRFGSDMVGLYCEPFPDSSWLLPQNFPRRKEQKHIESYESLLNKTHGSNVIWPSFLVLNLQHTHDGHNNFFHCDHSQSLLQKIPVLILKSDQYFSPSLFMIPSFGQELSKMFPVKDTVFHHLGRYLFHPSNEVWDAISRFYKAHLAKANEKIGLQVRIYNTHRAPHETIIDEILACAFKHNLLPQLDHRKSVISPSKNNTSKAVLVASLYPEYGEKLRALYLSNTTVTGEVVRVYQPSHEGHQKSNDNAHNIKAWTEIYLLSLCDALITSPKSTFGYVAQSLGGLKPWILQRAYHKQIPDPPCVQAVSMEPCLHYPPKHDCKANNIVKFTSLFPHIMHCEDVSNGLKLVDDHIHQSVTNS 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1145 612 PANTHER FUCOSYLTRANSFERASE 2-RELATED 41 603 IPR004938 GO:0008107|GO:0016020|GO:0042546
Prci13g1145 612 Gene3D - 383 545 - -
Prci13g1145 612 FunFam Galactoside 2-alpha-L-fucosyltransferase 217 268 - -
Prci13g1145 612 Gene3D - 216 306 - -
Prci13g1145 612 Pfam Xyloglucan fucosyltransferase 137 574 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1145 Prci-Chr13 9796250 9799721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1145 115 601 Xyloglucan Fucosyltransferase1 AT2G03220 48.485 2.15e-162 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1145 K13681 - gmx:100799776 740.339