Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2455 ATGGAAGGAATGCCTAATCAAAACTCAATGGCAAAGCCAGTAATGATAGAGAAGAAGGCAAGGCCACAAGAACAATTGAACTGTCCAAGGTGCAGTTCAACCAACACCAAGTTCTGCTATTACAACAACTATAGCCTCACACAGCCCAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACAGAAGGTGGGTCCCTCAGAAACATCCCTGTTGGAGGAGGTTCTAGAAAGAACAAGAACAAGGTCATCACATCCTCTTCCTCTTCTTCATCAACCTCATCATCATCCAAGGTTCCTGATCTAAATCCACCATTGCCAAGCCTCTCAGGGTTGAAGGATCCAAGTTTGAATCTCTCCCGAAGCCCGATGATGAACCAAAGCTTCCCAACTAACTGTACTATTTCCGCCCAGCAAAGTCCTAAGATCCATGGAGGCCAGGATCTTAATCTGGCTTTTCCCACTTCTTCTCTTTCAGCTCCTAGGGTTTTGAATAATAATATTCCTTATGTTCCCTCATTCATGATGCCAAATAGCTCACCGTATAGTAACATTAATTACCCGTCTGGATTAATTCCCATGCAAGAAGAAGCTAAACCCAGCCAGCTGGGATTTTCAGTGGATGGGCTTGGAAACAGATCGTACGGAGTACAAGAGAATGACCATGATGGCGGGAGGCTTTTGCTTCCTTTTGGAGGAGTCAAGCAGATTCCAGGTGGTGATGAAGTGGAACAAAATAATAAAGGACAAGGGAATTCAAGTGGGTTTTGGACTGGAATGATTGGTGAAGGATCATGGTAA 798 0.4436 MEGMPNQNSMAKPVMIEKKARPQEQLNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKNKVITSSSSSSSTSSSSKVPDLNPPLPSLSGLKDPSLNLSRSPMMNQSFPTNCTISAQQSPKIHGGQDLNLAFPTSSLSAPRVLNNNIPYVPSFMMPNSSPYSNINYPSGLIPMQEEAKPSQLGFSVDGLGNRSYGVQENDHDGGRLLLPFGGVKQIPGGDEVEQNNKGQGNSSGFWTGMIGEGSW 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2455 265 ProSitePatterns Zinc finger Dof-type signature. 28 64 IPR003851 GO:0003677|GO:0006355
Prci12g2455 265 MobiDBLite consensus disorder prediction 78 102 - -
Prci12g2455 265 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 175 IPR045174 GO:0003700|GO:0006355
Prci12g2455 265 MobiDBLite consensus disorder prediction 240 265 - -
Prci12g2455 265 MobiDBLite consensus disorder prediction 67 123 - -
Prci12g2455 265 ProSiteProfiles Zinc finger Dof-type profile. 26 80 IPR003851 GO:0003677|GO:0006355
Prci12g2455 265 MobiDBLite consensus disorder prediction 242 259 - -
Prci12g2455 265 Pfam Dof domain, zinc finger 24 80 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2455 Prci-Chr12 42169348 42171561 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2455 14 265 C2C2-Dof Transcription Factor Family AT3G61850 41.877 9.85e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci12g2455 zf-Dof 9.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2455 - - gmx:778110 261.922