Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1680 ATGAGAGCATTGTTCACAGTGTGTTGCATTGTTTTGCCTATTTTTGTGATTATTACTTGGCTACACTATTCATCAATCTCTTATCTTTTTCAAGAACTTCCCAACTTCAACAACATCTTGTCTGAAAAATCCCAGAAAGTTACAGCGGTTATTTCCAAGGAAGCAGACCCAGCCATTGCAGTGAAAGTGAAAGACCAGAGAATTACATTGGAACCAGAAGACAATTCTTCCGCTGGTCCAACAAGAGTTGATGATGAAGACAATCAACAGCTTCATGGACTTGACATGGCTTCAACATTTAATAATGAAGGATCATGCTTAAGCAGATGTCAATCTCACTTCTACCGCAAATCCTCCCTTCATAAACCCTCTTCGCCCCTCAAATCCAAGCTTCGTCACTATGAACATCTGCACACAACCTGTTCACCTTCCTTCTCCTTCATCAGAAATCACTACACCAACCCTAATAATTCCACCATCAAGCATGATGCTGATCATTCTACAAATTGCAGATACCTTATCTGGTCAGCCATGGATGGTTTAGGAAACAGAATTTTAAGCTTGGTTTCTGCATTTCTTTATGCTGTCCTCACAGACAGAGTTCTACTTGTCAAATTTGAATCTGACATGGGTGGTCTCTTCTGCGAGCCATTTCCAAATTCATCATGGTTATTATCGCCTAGGGATTTTCCTGATCATTGGGAAGATGATGGTGATCAGGAGCATAAGGAATCGTCAACTCATCATCGTCCTGTTCTTCATCTAAGACACACCAATGATGATCACTATGACTTCTTTCACTGTGGCTCTACCCAAGATCTTCTGCAGAAAGTTCCTGTGTTGATTTTGCAGTCGAATCAGTACTTTGTTCCTTCCCTTTTCACGATCCCATCTTTCAGGAAAGATCTTACAGAAATGTTCCCAGAAAAAGACGTAATCTTTCACCTTCTAGGACACTACCTTCTTCACCCATCAAATGTTGCATGGAAATTCATCAGAAACTTCTATCAGACTCATTTGGCCATGGCAAACCAGAAGATTGGCCTCCAGATTAGAGTGTTCGACACACACAGAGAACCCCATCAAGTTGTTCTCAACAAAATCATAGCTTGTGTCTCCAAGAACAATCTTCTTCCTCAATCAGATAAGCAAATTATACCAGTAACTAATTCTCCTTCTCTATCGCAGAACTATACCTCAAAAGCTGTTCTTGTAATTTCTTTATATTCAGAGTATGGAGATAAAATAAAGGCTATGTATATGGCAAACACAAGTGTAACCAATGGTGAGGTGATAAGAGTTTATCTGCCAAGTCATGAAGAGCATCAAAACTCAAATGATAACAAACACAACATGAAGGCCTGGACTGAGATGTATCTGCTGAGTTTGTGTGATGTATTGGTGACAAGTTCATATTCTACTTTTGGGTATGTTGCTCAGAGCCTTGGAGGTCTGAAGCCATGGATTCTGAATAGGACATTTGGTGGTGAAGAGGTTCCATCATCAGATCCTCCATGTGTAAGAGCCATGTCCATGGATCCTTGTTTTCACTATCCTCCTAAGCGTGATTGTAGTTCCAATACTATTGCCAATATTACTTCTTTATTTCCTCACACTGTGCACTGTGAAGACTTTGGAAATGGAGTGAAACTTATTAATTAG 1662 0.4001 MRALFTVCCIVLPIFVIITWLHYSSISYLFQELPNFNNILSEKSQKVTAVISKEADPAIAVKVKDQRITLEPEDNSSAGPTRVDDEDNQQLHGLDMASTFNNEGSCLSRCQSHFYRKSSLHKPSSPLKSKLRHYEHLHTTCSPSFSFIRNHYTNPNNSTIKHDADHSTNCRYLIWSAMDGLGNRILSLVSAFLYAVLTDRVLLVKFESDMGGLFCEPFPNSSWLLSPRDFPDHWEDDGDQEHKESSTHHRPVLHLRHTNDDHYDFFHCGSTQDLLQKVPVLILQSNQYFVPSLFTIPSFRKDLTEMFPEKDVIFHLLGHYLLHPSNVAWKFIRNFYQTHLAMANQKIGLQIRVFDTHREPHQVVLNKIIACVSKNNLLPQSDKQIIPVTNSPSLSQNYTSKAVLVISLYSEYGDKIKAMYMANTSVTNGEVIRVYLPSHEEHQNSNDNKHNMKAWTEMYLLSLCDVLVTSSYSTFGYVAQSLGGLKPWILNRTFGGEEVPSSDPPCVRAMSMDPCFHYPPKRDCSSNTIANITSLFPHTVHCEDFGNGVKLIN 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1680 553 PANTHER FUCOSYLTRANSFERASE 2-RELATED 17 552 IPR004938 GO:0008107|GO:0016020|GO:0042546
Prci12g1680 553 Gene3D - 330 487 - -
Prci12g1680 553 FunFam Galactoside 2-alpha-L-fucosyltransferase 168 219 - -
Prci12g1680 553 Gene3D - 167 221 - -
Prci12g1680 553 Pfam Xyloglucan fucosyltransferase 242 524 IPR004938 GO:0008107|GO:0016020|GO:0042546
Prci12g1680 553 Pfam Xyloglucan fucosyltransferase 87 232 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1680 Prci-Chr12 34502038 34515296 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1680 68 553 Xyloglucan Fucosyltransferase1 AT2G03210 44.597 5.54e-133 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1680 K13681 - gmx:100799776 559.681