Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2739 ATGTTGGGTAACTATGAGAAAATGGTACTCATCCCTCAAAACACTAAACAGTGGCCACAGAGGCAGCAGATAGATGATCAAAAGGTGTCGATGGCTTCTTCTTCTCATCATCAAAGGGTTATGGAAAAGCCAAACCAAGAGCTTCTTCAACAGCAACAAGAAGCTCTCAAGTGTCCTCGATGTGACTCATCAAACACCAAGTTCTGTTACTACAACAATTACAGTTTGTCTCAGCCCAGACACTTCTGTAAAGCCTGCAAACGATACTGGACTCGAGGAGGTACGTTGAGGAATGTTCCTGTAGGTGGAGGTTGCAGGAAAAACAAACGTGTGAAGCATCGTCCTTCTTCTTCATCATCATCAGCTTCAGATCAAACTCATAACGCTATTATTGCACCTTCTAATTCTTCTTCTTTCGCTGCCAGTACTACCGTCTCAGCTGCTTCAAACCCTCCTTCACAATCTCAGATCGATGTCGCTCCTTTACTTTATGGCTTGAATCTTCCGTTTCCAAGGTTCAATTCCAGTTCTGGGTTTGATCACCATCTTCAACCAGCTCAGATCAGTAATTCCATTGGGTTGGATTTCACTGAACATCATAATGGTTACCGAAATGGGTTTTCTTCAAATCCTAATCTTCTTTCAAGCTATAGCTCCTCCATCTTTGGAAATGCTTCTTCTTCGACATCTACAACCACACCCAGCATCATGGCTTCGCTGCTAAACTCTCCGAATCTGCAGCAACAAAAGTTCATCAATGGTGATTCTAACAGTACTTTTCAGGGGTTCGTCGCACCAGTACTAGAAGAGCTGGCAATAGCAGGCAATAATAATAACAACAATAATAGCACGAGTACTGAGGCATCAGAGATGCTTGCTTTAAAAGAAGTGAAATCTGTGGTGGAAGATGATAACAGGTTTCTGAGTTGCTGGCAAAGTAATAATAACCAGATCGAGCATCAAGCAGGCTTGTCCGATCCTTCTTCACTTTATTGGAACGCAGCAACAGCTATGGTGGGTACTACTACTTGGAATAATGATCAAACCAATATTGGTCCTCAGTCTCTTCTCTCATCTGATCTACAATGA 1089 0.4252 MLGNYEKMVLIPQNTKQWPQRQQIDDQKVSMASSSHHQRVMEKPNQELLQQQQEALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKHRPSSSSSSASDQTHNAIIAPSNSSSFAASTTVSAASNPPSQSQIDVAPLLYGLNLPFPRFNSSSGFDHHLQPAQISNSIGLDFTEHHNGYRNGFSSNPNLLSSYSSSIFGNASSSTSTTTPSIMASLLNSPNLQQQKFINGDSNSTFQGFVAPVLEELAIAGNNNNNNNSTSTEASEMLALKEVKSVVEDDNRFLSCWQSNNNQIEHQAGLSDPSSLYWNAATAMVGTTTWNNDQTNIGPQSLLSSDLQ 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2739 362 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 38 249 IPR045174 GO:0003700|GO:0006355
Prci11g2739 362 Pfam Dof domain, zinc finger 54 110 IPR003851 GO:0003677|GO:0006355
Prci11g2739 362 ProSitePatterns Zinc finger Dof-type signature. 58 94 IPR003851 GO:0003677|GO:0006355
Prci11g2739 362 MobiDBLite consensus disorder prediction 101 126 - -
Prci11g2739 362 ProSiteProfiles Zinc finger Dof-type profile. 56 110 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2739 Prci-Chr11 42826839 42828843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2739 50 194 C2C2-Dof Transcription Factor Family AT5G60200 46.897 3.09e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci11g2739 zf-Dof 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2739 - - pcin:129285070 658.292