Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2738 ATGAATGGTCAAGAAGGTCGTGGTGGAGACGTGAATGACCAGCCTCAGCTTCAGCAGCCACCGCAGCCGCAGCCGCAGCCGCAGCCTCCGCCGCCACAGAGATGCCCTCGCTGTGACTCTGTGAACACCAAGTTCTGTTACTACAACAATTATAGCCTCTCGCAGCCTCGTTACTTCTGCAAAACGTGTAAAAGGTACTGGACTCATGGTGGATCCTTGCGAAACATACCCATCGGAGGTGGTTGCAGGAAGGGAAAGCGGAACAAAGGTTCTTCGTCGTCATCGTCGTCGTCGTCAGCCACCTTACAGCTGGGCCGGTCACAGCTGCAACCTCGGCTGCAAGAGATGGTCTCTATGCAACCCAATCCGACAACGTTGTCTTCGCGCGTTCTCCTCGGTCGTTCTTCTTCGGCAGCGGTGGCGGTTCCTTCAATGAATCCCTACTATCAAGGCGGTGGGTATCTATCATCTCTGGCCGCGATTCATTCTCAAAACCCATTACCTCAACCATTATTCAGTCCGTCGTCTCTGAATCTTGCTCCTGCTAATCTGGGTTTTCTTCCTCCCGGGTTCAATGCTTCGTCGTCTCTGGCCTCGCCGGTATTCCAATCGGCAAACAGAAGCACGGAGGTAGAATCTCTGTATGCATCTGATCATGATCATTATCATCATCAAGGACTGGTTCAAAAGAGTGTGATAGGTAACAATAGCAGTTATGCTTCTCTTCATGAGTGGTCTCAGAACTCTTTGTGGAGTACTGTGAGCACAACTTCCATTGGAGACAATTCTGCGATTGCTCGCAATAATCATAATGATGATGATGATAATAGTAATCATAATAACGCTCATGCTGGATCGTCTTCTCTGAGTGCAAATCAATGGCCTGACCTACCAGGCCATGGCCCTCCTCCGTGA 915 0.5038 MNGQEGRGGDVNDQPQLQQPPQPQPQPQPPPPQRCPRCDSVNTKFCYYNNYSLSQPRYFCKTCKRYWTHGGSLRNIPIGGGCRKGKRNKGSSSSSSSSSATLQLGRSQLQPRLQEMVSMQPNPTTLSSRVLLGRSSSAAVAVPSMNPYYQGGGYLSSLAAIHSQNPLPQPLFSPSSLNLAPANLGFLPPGFNASSSLASPVFQSANRSTEVESLYASDHDHYHHQGLVQKSVIGNNSSYASLHEWSQNSLWSTVSTTSIGDNSAIARNNHNDDDDNSNHNNAHAGSSSLSANQWPDLPGHGPPP 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2738 304 MobiDBLite consensus disorder prediction 18 35 - -
Prci11g2738 304 MobiDBLite consensus disorder prediction 262 304 - -
Prci11g2738 304 Pfam Dof domain, zinc finger 33 87 IPR003851 GO:0003677|GO:0006355
Prci11g2738 304 ProSitePatterns Zinc finger Dof-type signature. 35 71 IPR003851 GO:0003677|GO:0006355
Prci11g2738 304 MobiDBLite consensus disorder prediction 1 17 - -
Prci11g2738 304 MobiDBLite consensus disorder prediction 280 294 - -
Prci11g2738 304 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 250 IPR045174 GO:0003700|GO:0006355
Prci11g2738 304 ProSiteProfiles Zinc finger Dof-type profile. 33 87 IPR003851 GO:0003677|GO:0006355
Prci11g2738 304 MobiDBLite consensus disorder prediction 87 105 - -
Prci11g2738 304 MobiDBLite consensus disorder prediction 77 105 - -
Prci11g2738 304 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2738 Prci-Chr11 42780624 42782581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2738 12 95 C2C2-Dof Transcription Factor Family AT5G60200 65.882 1.58e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci11g2738 zf-Dof 7.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2738 - - pcin:129284817 495.352