Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2812 ATGATATTGGAGATTCTTGTTCACTGGATTACCTTATTGACAGTATTTTCCCATTGTTCCGGAAGCACATTGAGCCAGATCTTCATCATGCACAGAATTAATAACAGCTTTGTTTCATCATTTAGAGAAGCCATCTACAAGGTGAAATGCAGAAGTGAGTCTCCTGATGGACATTTGGGTTCTGCCTTTCAACAAGATGAAGCCCAGACAGACAATTGTATAGAGATGTACCTTAGACCTCCTTCGGCTAGTGAAGAAGCAAGGATTAATGATTGGATCAAGGTGCGGCAATCTGGAATTAGATATTATCTTTCCCTTGGTGACCAGAGGATTGTTGACAAAAATTTTATTATCAGACCAAAGGCTGAGTTTGAGGTTGGGCGAATGACATTAGGAGGGTTGCTTGCTCTGGGTTACTCTGTTGTCGTTAGCTATAAACGTGCATCTACAACACTCAGTAATGGCAATGTTTCTGCGTCTTTTGAAACCATTGATGCTCTGGGTGAGACATACATGGTGCTGAGGGGAACAAATAGGAAAACAGTTGGAACAGAAGCATTGAAGATGGGTGTAAGTGGCCCTTGGATCACTAAATCATACCTGGAAATGATTCTTGAGAGAAAAGGTGTACCTCGTCTCAGTACACCACCACTTGTGTCTAATACACTTACACCTGGTGATCAAGAAAGAGCAGTTGTTGCACCAAAGCCAATCCGAGTTACCCCTGACCTTGTAACTGGACTCGAGGATTTATCTCAGCCATGGACTCGATCCCCAAGAAAGTCCAAAATGGAACCTGTCATAGCAACTTGGCATTTTATATCTTCGGATTCATCTCTGACTGACAACACAGTACTAGATCCTTCATCTTTCAGGGATACCATGAGACTTGCTCCAATGCCTGATTCCTATGACGTTGATAGGGGATTGCTTTTGGCCGTTCAAGCAATACAGGCTTTGTTGGAGAAGAAAGGAGTTCCCGTCATAGTTGGCATTGGAGGTCCAAGTGGGTCTGGAAAGACTAGTTTGGCCCATAAAATGGCAAATATCATTGGTTGTGAGGTAGTTTCTCTGGAAAGCTATTATAAACAAGTAAAGGATTTTAAATATGACGACTTTGGCTCACTTGATCTGGCTTTACTGTCAAAGAATATTGATGACATAAGAAATGTTCGAAGAACAAAAGTTCCTATATTTGACCTGGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGGGTTTATGCTTTGCATCCTGATATGCGAAAATCTCTTGACTTGTGGATTGCTGTTGTAGGAGGTGTTCATTCACATTTGATATCTCGAGTTCAAAGGGATAAGAGTAGAGTGGGATGTTTTATGTCTCAAAATGAGATTATGATGACAGTATTTCCTATGTTCCAGATGCATATTGAACCACATCTTGTCCATGCACATCTTAAGATAAGAAATGACTTTGACCCTGTTCTTTCCCCTGAGAGTTCCTTGTTTGTATTGAAGAGCAACAAAAAGGTAGCTTATCAAGACATTCTTACGATTCTTGATCCAGCAAAATTTTGCAGTTCTGTTCAGAAGTTCATTGATATATATTTAAAGCTTCCTGGGATCCCCTCTAACGGACAGTTGACAGAGGGTGATTGCATAAGAGTCAGAATATGTGAAGGAAAATTTGCTTTGTTGATACGTGAGCCTATTAGAGAAGGAAACTTCATCATTCAGCCCAAAGTGGATTTTGATATTGGCATTAGTACGGTTGCAGGTCTTTTCAATCTTGGGTATCAGGCAGTAGCTTATATTGAAGCATCTGCGTTGATTTACCAGGATGGAAAGATTCTGATTGAGGTCGACCATCTACAAGATGTCTCCGGTCCATACATTCAGATTAAGGGTGTTGATAAGAATGCCGTGGCAGCAGCTGGTTCAATGCTTAAATTGGATGGTTCATATACTACTAAAAGCTATCTTCAAATAATTTTGGAAAACCTACCTGCACTAGAAAGAACTTTTGGTGGCATACACTCTCAGCAGTCTGCGAGGATGCAAGAAATTGTTGAGTTTATTCAATCTCAGGGAAGCAGCTCAGCATCAGAATGCTCACCAAGCAGGGTGACGTCCCCTATGGAAGGAATTATCGAGGAGATGCAATCCAGAATTAGAAGGCTTGAACGGTGGCTTGCTGTAAATACGGTTTTATGGACATTTCTGATGTCTGCTCTCGTGGGTTATTCACTATATCAAAGGAAGCGTCAATGA 2289 0.4107 MILEILVHWITLLTVFSHCSGSTLSQIFIMHRINNSFVSSFREAIYKVKCRSESPDGHLGSAFQQDEAQTDNCIEMYLRPPSASEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYSVVVSYKRASTTLSNGNVSASFETIDALGETYMVLRGTNRKTVGTEALKMGVSGPWITKSYLEMILERKGVPRLSTPPLVSNTLTPGDQERAVVAPKPIRVTPDLVTGLEDLSQPWTRSPRKSKMEPVIATWHFISSDSSLTDNTVLDPSSFRDTMRLAPMPDSYDVDRGLLLAVQAIQALLEKKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKQVKDFKYDDFGSLDLALLSKNIDDIRNVRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDMRKSLDLWIAVVGGVHSHLISRVQRDKSRVGCFMSQNEIMMTVFPMFQMHIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILTILDPAKFCSSVQKFIDIYLKLPGIPSNGQLTEGDCIRVRICEGKFALLIREPIREGNFIIQPKVDFDIGISTVAGLFNLGYQAVAYIEASALIYQDGKILIEVDHLQDVSGPYIQIKGVDKNAVAAAGSMLKLDGSYTTKSYLQIILENLPALERTFGGIHSQQSARMQEIVEFIQSQGSSSASECSPSRVTSPMEGIIEEMQSRIRRLERWLAVNTVLWTFLMSALVGYSLYQRKRQ 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2812 762 CDD UMPK_like 329 497 - -
Prci10g2812 762 Pfam Phosphoribulokinase / Uridine kinase family 329 494 IPR006083 GO:0005524|GO:0016301
Prci10g2812 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 315 497 IPR027417 -
Prci10g2812 762 PANTHER URIDINE KINASE 305 691 - -
Prci10g2812 762 SMART AAA_5 326 470 IPR003593 GO:0016887
Prci10g2812 762 SUPERFAMILY CYTH-like phosphatases 535 669 IPR033469 -
Prci10g2812 762 Gene3D - 326 503 IPR027417 -
Prci10g2812 762 Gene3D - 511 674 - -
Prci10g2812 762 PRINTS Uridine kinase signature 448 458 - -
Prci10g2812 762 PRINTS Uridine kinase signature 327 344 - -
Prci10g2812 762 PRINTS Uridine kinase signature 354 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2812 Prci-Chr10 36594037 36608024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2812 322 463 PRT Gene Family AT1G55810 25.325 1.07e-07 53.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g2812 10 36594037 36608024 Prci10g2812 10 36594037 36608024 ECH