Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2789 ATGGAGACTCGTAAGGTAGGGTCGTCATCGTTGTCTTACTATGCCCTTCTTGGTATTAGTTCAGATTCTTCCGGTACAGAAATAAGGAGAGCTTATCACAAGCTTGCTTTGCAATGGCATCCAGATAGGTGGACAAGAACTCCTTCCTTGTTGAGTGAAGCCAAACAGAAATTTCAGCAAATTCAAGAAGCCTATTCAGTTTTATCAGACCACAAGAAAGAACTATACGATGCAGGGCTGTATGATCCTGATGACGAAGAAGATGAGGGCTTTTCTGAGTTTATGGAAGAGATGGTGTCTCTCATGACTCAAGTGAGGAGGGAGGAAAAGGGTTATTACAGTATGGAGGAGTTGCAGAGCCTGTTTGCTGAGATGAGTAATGAATTTAATCAGTCAGCTTCATGGCGTTTTGGGGCCTCCATTCTTGAAGATCACTGCTCTAAGAGGATCCGTTTGGACAAACAAGGCAGAATCTAA 477 0.4319 METRKVGSSSLSYYALLGISSDSSGTEIRRAYHKLALQWHPDRWTRTPSLLSEAKQKFQQIQEAYSVLSDHKKERXYDAGLYDPDDEEDEGFSEFMEEMVSLMTQVRREEKGYYSMEELQSLFAEMSNEFNQSASWRFGASILEDHCSKRIRLDKQGRI 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2789 159 CDD DnaJ 13 70 IPR001623 -
Prci10g2789 159 SUPERFAMILY Chaperone J-domain 9 84 IPR036869 -
Prci10g2789 159 PANTHER PUTATIVE, EXPRESSED-RELATED 9 134 - -
Prci10g2789 159 PRINTS DnaJ domain signature 149 159 IPR001623 -
Prci10g2789 159 PRINTS DnaJ domain signature 14 32 IPR001623 -
Prci10g2789 159 PRINTS DnaJ domain signature 53 73 IPR001623 -
Prci10g2789 159 PRINTS DnaJ domain signature 32 47 IPR001623 -
Prci10g2789 159 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Prci10g2789 159 Pfam DnaJ domain 13 78 IPR001623 -
Prci10g2789 159 SMART dnaj_3 11 73 IPR001623 -
Prci10g2789 159 Gene3D DnaJ domain 2 116 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2789 Prci-Chr10 36380788 36382643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2789 8 79 C2H2 Transcription Factor Family AT1G74250 45.205 3.95e-12 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g2789 10 36380788 36382643 Prci10g2789 10 36380788 36382643 ECH