Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2641 ATGGGTTCTAAGATGGAAGGACCGTCTACCCCAGCAATTCGACGAGATCCATATGAGGTATTGTCTGTGTTAAGGGACGCAAATGATCAGGAGATAAAAACTGCTTACAGAAAGCTCGCACTCAAGTATCACCCTGACAAAAATGCTGACAATCCTGAAGCTTCAGAACTCTTTAAAGAGGTTGCGTTTTCATACAGTATCTTGTCTGACCCAGAGAAGAGACGGCGATATGACAGTGCTGGATTTGAGGCACTTGAAGCAGACAGTGTGGACATGGAAGTTGACTTGTCCAATCTTGGAACTGTCAACACAATGTTTGCAGCTTTGTTCAGCAAGCTGGGTGTTCCTATCAAGACCACCATTTCAGCTACTGTTCTTGAAGAAGCTCTGAGTGGCACAGTTACAGTCAGACCCCTTCCAATTGGAACATCAGTTAGTGGAAAGGTGGAGAAGCAAGGCGCTCATTTCTTTGGTGTGACAATAAATGAGCAGCAAGCTGAGTTAGGGGTTGTAGTAAGAGCCACATCAACTGCACAGAGCAAATTCAAGTTGCTCTACTTTGAACATGATGCGAATGGTGGCTATGGCTTAGCACTGCAGGAAGACAGCGAAAAGACTGGCAGGGTGACATCTGCAGGAATGTATTTCTTGCATTTTCAAGTGTACAGATTGGATTCAACTGTGAATGCTTTAGCAATGGCAAAGGATCCTGAAGCTGCCTTCTTCAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTTGGAACTAAAGCCTGGCACTCATATATTTGCCGTTTATGGAGATAACTTCTTTAAGACTGCCACCTATACCATTGAGGCACTTTGTGCAAAATCATACGAGGATACCAATCAAAAACTTAAGGACGTTGAGGCTAAAATTTTATTAAAAAGGAATGAGCTACGCCAATTTGAAACAGAATATAGAAAGGCATTGGCACACTATCAAGAAGTGACTGAAAGATACACCAAAGAAAAGCAAGCAGTAGACGAGCTTCTGAAGCAGAGAGATGGCATCCATTCTTGCTTCACTGTTTCCAGGCCAATCATTTCTAATGGGAATGGAAGTAATTTGAGTAATGGAAGTAGTAGCAAGAAATTTTCTGGTGAAGATTCCAAAACAGGGAGCCCTAAGGAAGATGGAAGCTCGGATGGCAAGGATAAATCAGGAAGAAGGAAATGGTTTAATCTCAATCTTAATGGCTCTGGTAAGAGAATGTTTTGA 1242 0.4251 MGSKMEGPSTPAIRRDPYEVLSVLRDANDQEIKTAYRKLALKYHPDKNADNPEASELFKEVAFSYSILSDPEKRRRYDSAGFEALEADSVDMEVDLSNLGTVNTMFAALFSKLGVPIKTTISATVLEEALSGTVTVRPLPIGTSVSGKVEKQGAHFFGVTINEQQAELGVVVRATSTAQSKFKLLYFEHDANGGYGLALQEDSEKTGRVTSAGMYFLHFQVYRLDSTVNALAMAKDPEAAFFKRLEGLQPCEVLELKPGTHIFAVYGDNFFKTATYTIEALCAKSYEDTNQKLKDVEAKILLKRNELRQFETEYRKALAHYQEVTERYTKEKQAVDELLKQRDGIHSCFTVSRPIISNGNGSNLSNGSSSKKFSGEDSKTGSPKEDGSSDGKDKSGRRKWFNLNLNGSGKRMF 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2641 413 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Prci10g2641 413 PRINTS DnaJ domain signature 73 92 IPR001623 -
Prci10g2641 413 PRINTS DnaJ domain signature 53 73 IPR001623 -
Prci10g2641 413 PRINTS DnaJ domain signature 36 51 IPR001623 -
Prci10g2641 413 PRINTS DnaJ domain signature 18 36 IPR001623 -
Prci10g2641 413 Gene3D DnaJ domain 4 98 IPR036869 -
Prci10g2641 413 MobiDBLite consensus disorder prediction 377 399 - -
Prci10g2641 413 ProSiteProfiles dnaJ domain profile. 16 81 IPR001623 -
Prci10g2641 413 SMART dnaj_3 15 73 IPR001623 -
Prci10g2641 413 CDD DnaJ 16 70 IPR001623 -
Prci10g2641 413 Coils Coil 286 341 - -
Prci10g2641 413 MobiDBLite consensus disorder prediction 359 376 - -
Prci10g2641 413 MobiDBLite consensus disorder prediction 359 413 - -
Prci10g2641 413 FunFam Chaperone protein dnaJ 16 2 98 - -
Prci10g2641 413 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 3 410 - -
Prci10g2641 413 SUPERFAMILY Chaperone J-domain 15 85 IPR036869 -
Prci10g2641 413 Pfam DnaJ domain 16 78 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2641 Prci-Chr10 34750826 34757520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2641 9 88 C2H2 Transcription Factor Family AT1G74250 38.824 1.48e-10 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g2641 10 34750826 34757520 Prci10g2641 10 34750826 34757520 ECH