Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2640 ATGGAGGATCACCAAATTTTCTACCCATCCAAACCAACAAACCCTTTAAAGCTTTTCGGCTTCAGCGTCGTCCACGACCCCCACCTTCTCCAAGATGAAGACCCAGCAGTGCTTGCACACGATGTCTCTGACCCCATCTCCAAGCCCACTTCCCCATCCGCCTCACCCGATTCCGCCACATCTGCCGGCGCCGGCGCCTTCCCTGCTTCCTCAGCCGATAGGAAATACGAGTGTCAGTATTGTTGTCGCGAGTTCGCCAACTCGCAGGCCCTGGGCGGCCACCAGAACGCTCACAAGAAAGAGCGCCAGCAGCTGAAGCGGGCTCAGTTACAAGCCTCCCGAAACGCCGCCGTTTCGTTCGTTAGGAACCCAATAATCTCAGCCTTCGCTCCTCCGCCTCATTTGCTCGCTCCGGCGGGCCATGTCATGGTTCCGCCAGCTTCTCAGACGTCTTGGGTTTATGTTCCGCCGCGTTCCGCTCCTCCACCGTTCCACGTATCGGTATCACACGGGTGCATGTTCCCTTCGCCGACGAATAGTACCATCTGTAGTAGTAATAGTAATCAGGGTGCGAGATCGGCGGGCGGAGGGATGTTATCCTGTGGTAGCAGCGCAGGGGATGGCATGGGATCTCAAGTACATGGTAGGGCCCATGGACCATCTTTAAGTAGATTTTCAAAAGGGGATGCTGGCCCCAGCTTCGATGACCCATTGGGCTTGGACTTGCATCTAAGCCTTGCGCCAGCTGCGCCGTGA 756 0.5675 MEDHQIFYPSKPTNPLKLFGFSVVHDPHLLQDEDPAVLAHDVSDPISKPTSPSASPDSATSAGAGAFPASSADRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVSFVRNPIISAFAPPPHLLAPAGHVMVPPASQTSWVYVPPRSAPPPFHVSVSHGCMFPSPTNSTICSSNSNQGARSAGGGMLSCGSSAGDGMGSQVHGRAHGPSLSRFSKGDAGPSFDDPLGLDLHLSLAPAAP 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2640 251 MobiDBLite consensus disorder prediction 203 231 - -
Prci10g2640 251 ProSitePatterns Zinc finger C2H2 type domain signature. 78 98 IPR013087 -
Prci10g2640 251 MobiDBLite consensus disorder prediction 41 66 - -
Prci10g2640 251 FunFam Zinc finger protein 6 68 126 - -
Prci10g2640 251 MobiDBLite consensus disorder prediction 46 60 - -
Prci10g2640 251 SUPERFAMILY beta-beta-alpha zinc fingers 73 103 IPR036236 -
Prci10g2640 251 Gene3D Classic Zinc Finger 67 123 - -
Prci10g2640 251 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
Prci10g2640 251 PANTHER ZINC FINGER PROTEIN 5 12 250 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2640 Prci-Chr10 34711416 34712539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2640 7 250 C2H2 Transcription Factor Family AT1G68360 45.255 3.13e-56 178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g2640 10 34711416 34712539 Prci10g2640 10 34711416 34712539 ECH