Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2624 ATGAGACTTCCTTTCTTCTCCAGTCACTGTTCTCACCATTGCTCCTCCGTTCAATTTCACCATTCATCTCTTACCCTGCTTGCTTCCTCTACCAGAAGAAACCGCTGTCCGAGCATGGACGCTGCTCCAGTCGGAAACCGCCGGAAAGAGAAGGTGATTGTCATAATGGGCGCCACCGGTGCCGGGAAATCCCGACTCTCCATTGACCTCGCGACCCGTTTCCCCTTCTCGGAAATCATTAACTCCGATAAAATGCAAGTTTACAGGGGCCTCGACATCACCACCAACAAGATCCCCATTGACAAGCGAAACGGCGTCCCTCACCATCTCCTAGGAGAAGTGGACCCGGAAATCGGGGAGTTCACGCCTTTGGATTTTCGCTTCCACGCCGGCTCTGTCATCTCCGACATTACTTCCAGGAGGAAGCTTCCCATCGTTGTTGGCGGGTCTAACTCGTTCGTTCAGTCTCTGCTCGCCGACCGATTTGACCCCGAGGTAAATGTATTCGATGAGTCATCGTCGTCGAGTTTGATCTCGTCGGAGTTGAGGTACGAGTGCTGCTTCTTGTGGGTGGATGTATCATTTCCTGTTTTGTCGGATTACGCAAGGAAGCGAGTCGACGACATGCTCAACTTGGGAATGGTGGAAGAGTTAGCCAAGTCGTTCGACCCGGACGCGGGCGATTTAGAGGAAGACTCGGAGAACCGGATTGGATTGAGAAAAGCCATCGGCGTGCCGGAGTTCGACTGGTATTTCAAGAGATACCCGCCGCCGGGAGGGCTGAGAGCAGAGTGTAGAAGCGAAGAGGATCGAGTACGGAAGGGTGCATACGAAGAGGCGGTGAGAGCGATAAAGGAGAACACGTGTGAGCTAGTGAAGAAACAGATGGGGAAAATCTTGCTGCTAAAAGAGGCGGGGTGGGACCTACGGAGGCTGGACGGGACCGAGGCGTTCAGGGCGGCGTTGGGAAAGAGAGGCGGCGGATACGGCGGCGAGAGGTGGTCGGATATTTGGGAGAGGGAAGTAGAGGAGCCAAGCGTGAAGATTGTGAATAGCTTCTTGCGGGAGTAG 1071 0.5415 MRLPFFSSHCSHHCSSVQFHHSSLTLLASSTRRNRCPSMDAAPVGNRRKEKVIVIMGATGAGKSRLSIDLATRFPFSEIINSDKMQVYRGLDITTNKIPIDKRNGVPHHLLGEVDPEIGEFTPLDFRFHAGSVISDITSRRKLPIVVGGSNSFVQSLLADRFDPEVNVFDESSSSSLISSELRYECCFLWVDVSFPVLSDYARKRVDDMLNLGMVEELAKSFDPDAGDLEEDSENRIGLRKAIGVPEFDWYFKRYPPPGGLRAECRSEEDRVRKGAYEEAVRAIKENTCELVKKQMGKILLLKEAGWDLRRLDGTEAFRAALGKRGGGYGGERWSDIWEREVEEPSVKIVNSFLRE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2624 356 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 195 309 - -
Prci10g2624 356 Gene3D - 49 354 IPR027417 -
Prci10g2624 356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 227 IPR027417 -
Prci10g2624 356 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 49 354 IPR039657 -
Prci10g2624 356 Pfam IPP transferase 180 296 - -
Prci10g2624 356 Pfam IPP transferase 86 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2624 Prci-Chr10 34533532 34535428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2624 183 354 C2H2 Transcription Factor Family AT2G27760 26.042 1.49e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g2624 10 34533532 34535428 Prci10g2624 10 34533532 34535428 ECH