Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2622 ATGAGACCAGAAGAGAACCCATTAGACCTCAACAATTTGCCTGATGACTACCATAGAGATGGCAAACAAGTCTTCGAAGATATCTCGTCCGGTTGCAGGAAAAAGAAAAGCGGCGGGAAAGATGGAAAAGAAGAGTGTGGTAAGGTCTACGAGTGTAGGTTTTGTTCCCTCAAGTTCTGCAAATCTCAGGCTCTTGGTGGTCACATGAACCGTCACCGCCAAGAAAGGGAAACCGAGACGCTGAACCATGCTCGTCAGCTCGTCTTCCGTAGTGATCACACCATAGCCGCCCAAGGGGCCCCTCACTTAGGGTGTTGCCAACCAGTAGTAGCGGGAAGCTACCATCCAGGTGGAGGGGGAGGCAACATGGGAGACCCAACAATGGGTCTGAGATTTCCAAGGTACTTGCCGGGGTCATCCTCGGCCCCGCCACAGCCGCCACCACAGCCAGCTCAGCCTTACATTTACGCGTCTCCGTCGTCACGACCAATATCATCGTATCCGTCCCACTACAACTCGTCGCACCAAGTGAACGACTACTATGTGGGTCACGTTCTGCACAACTACGTGGGCGATTCATCGAGCTACACCTGTATCGGGGCACCGGTGGGTCAAGGGTTCGTTGCCAAGGACGGGACGCTGCAGAATCAGGAAGAGGGTTTGAATTGGGGAAGGAGCTATTCAGCGATCAATCGGTTTCAAGATGGGTTCTAA 714 0.5308 MRPEENPLDLNNLPDDYHRDGKQVFEDISSGCRKKKSGGKDGKEECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNHARQLVFRSDHTIAAQGAPHLGCCQPVVAGSYHPGGGGGNMGDPTMGLRFPRYLPGSSSAPPQPPPQPAQPYIYASPSSRPISSYPSHYNSSHQVNDYYVGHVLHNYVGDSSSYTCIGAPVGQGFVAKDGTLQNQEEGLNWGRSYSAINRFQDGF 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2622 237 MobiDBLite consensus disorder prediction 1 20 - -
Prci10g2622 237 MobiDBLite consensus disorder prediction 118 154 - -
Prci10g2622 237 ProSitePatterns Zinc finger C2H2 type domain signature. 52 72 IPR013087 -
Prci10g2622 237 FunFam Zinc finger protein STAMENLESS 1 26 98 - -
Prci10g2622 237 ProSiteProfiles Zinc finger C2H2 type domain profile. 50 77 IPR013087 -
Prci10g2622 237 PANTHER ZINC FINGER PROTEIN JAGGED 34 207 IPR045320 GO:0003700
Prci10g2622 237 SUPERFAMILY beta-beta-alpha zinc fingers 48 78 IPR036236 -
Prci10g2622 237 Gene3D Classic Zinc Finger 28 101 - -
Prci10g2622 237 MobiDBLite consensus disorder prediction 139 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2622 Prci-Chr10 34476958 34478951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2622 4 206 C2H2 Transcription Factor Family AT1G13400 44.393 7.86e-33 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci10g2622 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g2622 10 34476958 34478951 Prci10g2622 10 34476958 34478951 ECH