Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2603 ATGGCCTCGGATGCACATGGCTCCCGTCGTAAGCACCGGCGCTCATCTTCCCCCGAAGAAGTTGAGCGATCCTCTAAGCGTCACAAGCACCGGCACCATGGCAACCGGCATCATCGGCACCGCCACAGTGGCAGGAAACGCGAAGAAGAGCTTGAACTTGATGCTGAAACTGTCGATAAGGTTCCTTCTCCTACTCTTGCCCCTAATTTTGATCCGAAGGTCCCTAGGCTTGATGATGATGTGGAGGAGGGTGAGATTCTCGAAGAGGAGGGTTCCGGTGGCCGAGATGGTGACGTTGGAAAAAAGCATACGGAGTCCGATGTTGAGTCTGGTGAGATTATGGCCACGGGAGGTCGAGGTACTCGATCTGATAATTCAAATCCAGTACATTGCACTGAAGAGATGTTGCATCGAAAAGATGCTGTTCCTTCTAAAGAGACGGTAGGGAGCAATGCTAAAGGTTTAGAAACTGATAATGAGGATATTAACAATGGTAGATTTGTTAGTCCAGGATTGGATGGAGATGCTATTTGCCATCAGAGACATACTGGTTATGACAGAAATGAGGTTGATGGTTCTTCTACTCATTCAAGTGCCGAGTCTCTGGATGGTAAGCATGCTAGAGCTAGTTCAGTTGGTTTGGGCAATGGGTATTTGGATCGTAAATCTTCCAAAGAGGATAAATGGCAGCATGGGGAGCTCAGATGTTTTAGAGGAAATGAGAAGCTAAAAGGTGACTATGATAATGAAGACCTGGAGGTTACTGGAGGCAAAGCTAGGATTCATAGAAAAAACTCCTCCCCTGAAAGTGGAGGAGGCAAATATAAGACCGGGGAAAGCTCACCTAACTATAGATGTAGGAGTCAATCTAGATCAAGTGGTCATACTCATACTGTAATAGAATATGCTCATTACAGGAGAAGGAATGATGAGGAAAGAATAGAGGATCATGGCAGGGAGCGTGAACATGTCAGTAGAGATTTAATGGTAGGTGATAGAAGGGAGCACAGTTCCAGTTACTACAGTCGAGAGGCCCGAGACAGAGAGAGAAGCAAGGACAGGGAGGGGGATAGGGACCTAAGAAGGGAAAAGGAACGAGAAAGGAGTCGGAATAGGGAGGATGACCGTGCACATAGGAGGGAAAAAGAACGTGAAAGGAGTCACGAGAAGGACAGAAGGGATGCTGAAAAAGATAGGAGCAGGGGAAGAGAGGTGGACAGGGATAGAAGAAGAGAGAAGGAGCGAGATAGAGATAGGAACTGGGAGACAATGGCTGAGCGGGAGAGAAGGGATAGGGAAAGAGAGAGGAGCAGGGACAGAGCAAGGGTTGGAGAGAGAGGTAGAGTCCGGGAGAGTGAAAGGGATGATAAGCATCGAGAAAGAGATAAGATTAGGGACAGAGAGAGGCATAAGGATAGAAACGCCCTTGATAAAGATAAATATCTGGGTAATGAGCATGGTAATGATAGCCGGGACAGAGATGTACGGTCTAGGCATTCAAGACATGAAGAAGCGGAAAGCCATCGGGAGAGAAAAAGAAATTCTGAGTCTGTGAAAGCTGATAACCCTCTGGACAGAGGTGAGGATGAACAAGATGACTTAGATGAGATGGTTGCATTGCCATTTGCTGAACAAGAAGAAGAAGATTTCAATAGAATTAAGGAGGAGAGTAGAAGGAGAAGGGAAGCAATCTTGGAGAAATATAAAAAGCAGCAACCACTGCAGCATCAACAAGCAGAACAAACTTATGAAAGTACAGAAAAAGATAAGGATCCTGTGAACATTCCGGCTGCTGTTTCTGAAGCTGCTGATTCTAAGAATGATGGTGTTGATGTTTTTGAAGCGGAAACATCTTTTTCTGTTGGTAAATCTCCTCGAGAAAATGGAAATGCTGCATCTGAAAAGATCCCTGGTGTTGCTGGGGGCTTGGGAGAGGGTACTCCAAAGAGTGAAAGATCTGATGACAAGTTTTGTGATGACATATTTGGTGAGACACCAACGGGAGTTCGGAAATCGGGCAAAGGGGATGGATTGCGTGTTGATAGAGGTGGATTGCATGACAATTGGGATGATGCAGAGGGGTATTACAGCTATCGTTTTGGTGAAATACTTGATGGTCGATATGAAGTTATAGCAGCTCATGGTAGAGGTGTCTTTTCGACAGTTGTTCGTGCAAAGAATCTAAAGGCTGGTAATGGTGAGCCTGAAGAAGTAGCTATAAAAATTATTCGTAATAATGACACTATGTACAAGGCTGGTATGGATGAGTTGGTCATACTAAAGAAATTAGTAGGTGCTGATCCAGATGACAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTCATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCATACGCAAAACAACTTTTTATTGCACTGAAGCATCTTCGGAACTGTGGTGTTCTTCATTGTGATATAAAGCCAGACAATATGTTGGTGAACGAGGCTAAAAATGTGTTGAAGCTTTGTGACTTTGGTAACGCTATGTTTGCTGGAAAGAATGAAGTTACACCATACCTTGTTAGTCGTTTTTATCGTGCCCCTGAAATAATACTTGGCTTGCCATATGATCATCCGCTGGATATATGGTCTGTAGGCTGTTGCTTGTATGAACTCTATACCGGAAAAGTTCTTTTTCCGGGTCCTAGTAACAATGACATGCTACGTCTTCACATGGAATTGAAGGGCCCTTTTCCAAAGAAGATGCTTCGTAAGGGAGCATTTATTGATCAGCATTTTGACCAGGACTTGAATTTTCTTGCTACAGAAGAGGATCCAGTGACAAAAAAGGCTATAAAGCGGTTGATTCTCAATATAAAGCCCAAAGATATTGGAACTATCATTGCTGGCTCTCCTGGAGAGGATCCAAAGATGTTAGCCAATTTCAAAGATCTTTTGGACAAGGTTTTTGTCCTGGATCCAGAGAAGAGGTTGACAGTTTCACAGGCATTAAGCCACCCATTCATCACTGGCAAGTGA 3081 0.4414 MASDAHGSRRKHRRSSSPEEVERSSKRHKHRHHGNRHHRHRHSGRKREEELELDAETVDKVPSPTLAPNFDPKVPRLDDDVEEGEILEEEGSGGRDGDVGKKHTESDVESGEIMATGGRGTRSDNSNPVHCTEEMLHRKDAVPSKETVGSNAKGLETDNEDINNGRFVSPGLDGDAICHQRHTGYDRNEVDGSSTHSSAESLDGKHARASSVGLGNGYLDRKSSKEDKWQHGELRCFRGNEKLKGDYDNEDLEVTGGKARIHRKNSSPESGGGKYKTGESSPNYRCRSQSRSSGHTHTVIEYAHYRRRNDEERIEDHGREREHVSRDLMVGDRREHSSSYYSREARDRERSKDREGDRDLRREKERERSRNREDDRAHRREKERERSHEKDRRDAEKDRSRGREVDRDRRREKERDRDRNWETMAERERRDRERERSRDRARVGERGRVRESERDDKHRERDKIRDRERHKDRNALDKDKYLGNEHGNDSRDRDVRSRHSRHEEAESHRERKRNSESVKADNPLDRGEDEQDDLDEMVALPFAEQEEEDFNRIKEESRRRREAILEKYKKQQPLQHQQAEQTYESTEKDKDPVNIPAAVSEAADSKNDGVDVFEAETSFSVGKSPRENGNAASEKIPGVAGGLGEGTPKSERSDDKFCDDIFGETPTGVRKSGKGDGLRVDRGGLHDNWDDAEGYYSYRFGEILDGRYEVIAAHGRGVFSTVVRAKNLKAGNGEPEEVAIKIIRNNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGPSNNDMLRLHMELKGPFPKKMLRKGAFIDQHFDQDLNFLATEEDPVTKKAIKRLILNIKPKDIGTIIAGSPGEDPKMLANFKDLLDKVFVLDPEKRLTVSQALSHPFITGK 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2603 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Prci10g2603 1026 Coils Coil 378 398 - -
Prci10g2603 1026 MobiDBLite consensus disorder prediction 527 543 - -
Prci10g2603 1026 FunFam Serine/threonine-protein kinase PRP4 homolog 768 1024 - -
Prci10g2603 1026 Gene3D Phosphorylase Kinase; domain 1 679 767 - -
Prci10g2603 1026 MobiDBLite consensus disorder prediction 270 297 - -
Prci10g2603 1026 MobiDBLite consensus disorder prediction 26 44 - -
Prci10g2603 1026 ProSiteProfiles Protein kinase domain profile. 708 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2603 1026 MobiDBLite consensus disorder prediction 220 269 - -
Prci10g2603 1026 MobiDBLite consensus disorder prediction 150 164 - -
Prci10g2603 1026 Pfam Protein kinase domain 709 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2603 1026 MobiDBLite consensus disorder prediction 1 654 - -
Prci10g2603 1026 PANTHER DUAL SPECIFICITY PROTEIN KINASE 371 1024 - -
Prci10g2603 1026 SUPERFAMILY Protein kinase-like (PK-like) 695 1025 IPR011009 -
Prci10g2603 1026 Gene3D Transferase(Phosphotransferase) domain 1 768 1024 - -
Prci10g2603 1026 SMART serkin_6 708 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2603 1026 MobiDBLite consensus disorder prediction 545 569 - -
Prci10g2603 1026 MobiDBLite consensus disorder prediction 300 526 - -
Prci10g2603 1026 FunFam serine/threonine-protein kinase PRP4 homolog 679 767 - -
Prci10g2603 1026 CDD STKc_PRP4 707 1023 IPR044092 GO:0004674|GO:0006468|GO:0045292
Prci10g2603 1026 MobiDBLite consensus disorder prediction 88 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2603 Prci-Chr10 34056435 34064704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2603 661 1025 MAP Kinase Gene Family AT2G18170 30.709 5.97e-28 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Prci10g2603 Pkinase 6.3e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g2603 10 34056435 34064704 Prci10g2603 10 34056435 34064704 ECH