Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1550 ATGTCAGCTCCGGCAGCGGCGGCGACGAAAGACGAGAGCCAGGGCTCAGGTGGTCCGAAAAGCACCTCGGCGGCGGCGATGCAGGTGGAGCAAGGGCTAAAGTGCCCGAGATGTGACTCGCCCAACACTAAATTCTGCTACTACAATAATTACAGCCTGACTCAGCCGAGGCATTTCTGCAAGACTTGTCGTAGATACTGGACAAAAGGCGGAGCCTTGCGTAACGTTCCTATTGGTGGCGGTTGCCGGAAGAACAAGAAACTGAAATCATCGTCATCTTCAAGACTCTCAAATGACGATGGCTTTTCCCCTTCTCTGGATTTTCACCTTGGTGGAACTCCTGCTAGCTTCTTACCCTTCCCTAGGCTGAACAATCAGCCTCCAGCTTTTAACCTCGAAGGAACCTCGAGTTCTTTCAATATCGGATTTAATTACCCGCTTAATGGCGGTGTAATTCAAGGCATGAGCTCCATGAACGTTCAGAGCAGCCTTGCTTCTTCGATCGAGTCCCTGAGCTCTATAAACCAGGACCTGCACTGGAAGCTGCAGCAGCAGAGACTAGCTATGCTGTTTGGAGGAGATAATACTACTGCTAGTAGCGTTCTAAAAGATAACCGTCCCGTTTCAGCCATTAATCATGAGAACCAGAGTCATCATCAGAAATCACCACACCCTATTTTGTTTCAGAATCTTGAGATTTCGAAGCCTGAAGAGATTTGTCCCGACTTTGGAAATTCCAGAAGAGATACACCTACAGAGTGGTTCTTCGGAAGTTCTTATGCTTCAGTGACTCCAACACCCACTGCTAGCAGTGGAGGATTAGGTACTGGCAATGATAATAATGGAAGCAGTAACTGGAGTGTTCATGGTTGGGGTGATGTGCAGCAGCAATACAGTGCTTTGCCCTAG 909 0.4851 MSAPAAAATKDESQGSGGPKSTSAAAMQVEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKLKSSSSSRLSNDDGFSPSLDFHLGGTPASFLPFPRLNNQPPAFNLEGTSSSFNIGFNYPLNGGVIQGMSSMNVQSSLASSIESLSSINQDLHWKLQQQRLAMLFGGDNTTASSVLKDNRPVSAINHENQSHHQKSPHPILFQNLEISKPEEICPDFGNSRRDTPTEWFFGSSYASVTPTPTASSGGLGTGNDNNGSSNWSVHGWGDVQQQYSALP 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1550 302 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 22 205 IPR045174 GO:0003700|GO:0006355
Prci10g1550 302 MobiDBLite consensus disorder prediction 265 291 - -
Prci10g1550 302 ProSitePatterns Zinc finger Dof-type signature. 35 71 IPR003851 GO:0003677|GO:0006355
Prci10g1550 302 MobiDBLite consensus disorder prediction 1 25 - -
Prci10g1550 302 Pfam Dof domain, zinc finger 31 87 IPR003851 GO:0003677|GO:0006355
Prci10g1550 302 ProSiteProfiles Zinc finger Dof-type profile. 33 87 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1550 Prci-Chr10 10804730 10806134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1550 20 302 C2C2-Dof Transcription Factor Family AT5G65590 38.924 1.03e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci10g1550 zf-Dof 8.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1550 - - pcin:129284602 604.364