Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0524 ATGGCTCTCTGGGAAGAAGCCCAAGATTTGCAGGACTCTTCGTTATTCCTCGACGCGCTCCTCTGTCAGGAGGATGGCTTCGAACAAGATTCTGCTGGGGAGAGTCGTGACTCCGATTCGGCCGTTAGAGATCCCTCATCTTTCCCTTTCATTTTGTTGGATAATGACTTGTTCTGGGAGGACGCCGAGCTTGTCTTCCTAATCTCTAAGGAGGGAGAAACTCGTTTAAATTCAAATAATCTTATTGCCGACGGAGCCTCTACAGGGAGCTCACGAGAGGCTGTGAGATGGATTTCAAGAGTCTGCGCGCGCTATGGTTTCTCTACTTTGACCATTGTTCTTGCTGTGAACTACTTCGATAGATTCGCCACCAGCCTGAAGTTTCAGAAGGATAAGCCCTGGATGACACAGCTCGCTGCGGTTGCCTGTTTAGCTCTGGCTGCCAAAGTCGAAGAGATCCGAGTCCCGCTTCTTTTGGACCTGCAAGTGGAGCAAGCGAAGTACGTGTTTGAAGCGAAGACAATACAGAGAATGGAAATCCTAGTGCTATCAACTCTTAACTGGAGGATGAACCCGGTGACTCCCATCTCTTTCTTTGAACTTATTGTGAGAATGCTGGGCCTTAAGAGCCGCTTGCACTGGGAGTTCTTGTTTCGGTGCGAGCGTGTGCTTCTCTGTCTCATTATGGATTCAAGGCTTATGAATTATCGTCCATCTACATTAGCTGTTGCTATAATGATCCACGTTATTAGTGAGATTGAACCTTTAAATGCAAGGGAGCACAGAAATCAACTCATGGCTTTACTCAAACAGTGAGGTTTGTGTCAGCTGATCTTTCAGGAACAAGTGAATGAATGTTACAAACTTATGAAAGTATTATGCTGTCACGAAGACATTCAAAATCTTAACCAGAAACGCAAGCGCCTGTCTAGCCCAGATGGTGTCATTGATGTGTCTTTCAGCAATGACAAGTCAAGTGACAGGGCAAAGGCATCATCGGTCTCATTGTCACTGGAGCCACTGTTTAAGCGAAACAGGGCCCTCGAGCAGCAGATGCAATTGCCATCCATAAATCGGGTGTCTATTGATGTTCTTCACAGCCCTCGTTAG 1110 0.4667 MALWEEAQDLQDSSLFLDALLCQEDGFEQDSAEXESRDSDSAVRDPSSFPFILLDNDLFWEDAELVFLISKEGETRLNSNNLIADGASTGSSREAVRWISRVCARYGFSTLTIVLAVNYFDRFATSLKFQKDKPWMTQLAAVACLALAAKVEEIRVPLLLDLQVEQAKYVFEAKTIQRMEILVLSTLNWRMNPVTPISFFELIVRMLGLKSRLHWEFLFRCERVLLCLIMDSRLMNYRPSTLAVAIMIHVISEIEPLNAREHRNQLMALLKQXGLCQLIFQEQVNECYKLIXKVLCCHEDIQNLNQKRKRLSSPDGVIDVSFSNDKSSDTXAKASSVSLSLEPLFKRNRALEQQMQLPSINRVSIDVLHSPR 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0524 372 Pfam Cyclin, N-terminal domain 69 192 IPR006671 -
Prci10g0524 372 SMART Cyclin_C_2 194 325 IPR004367 -
Prci10g0524 372 SUPERFAMILY Cyclin-like 176 304 IPR036915 -
Prci10g0524 372 PANTHER CYCLINS 59 293 IPR039361 -
Prci10g0524 372 Gene3D - 193 273 - -
Prci10g0524 372 SUPERFAMILY Cyclin-like 61 192 IPR036915 -
Prci10g0524 372 CDD CYCLIN_AtCycD-like_rpt2 194 291 - -
Prci10g0524 372 Gene3D - 93 192 - -
Prci10g0524 372 Pfam Cyclin, C-terminal domain 194 315 IPR004367 -
Prci10g0524 372 CDD CYCLIN_AtCycD-like_rpt1 93 189 - -
Prci10g0524 372 FunFam D6-type cyclin 77 192 - -
Prci10g0524 372 SMART cyclin_7 97 185 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0524 Prci-Chr10 3447779 3450341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0524 1 362 Core Cell Cycle Gene Families AT5G67260 48.370 3.93e-100 300
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0243 5 3325180 3327001 Prci10g0524 10 3447779 3450341 CCT
Prci10g0524 10 3447779 3450341 Prci5g0243 5 3325180 3327001 ECH
Prci2g1341 2 10145461 10147284 Prci10g0524 10 3447779 3450341 ECH
Prci10g0524 10 3447779 3450341 Prci10g0524 10 3447779 3450341 ECH