Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral814g00004 ATGTCAACAGCGAGAGATCCTGCTATAAAGCTTTTCGGTAGAGATATTCCTGTAGATTCAACACGCAACACCGATTCGCCTCAAGTTATGAACAGGTATGATAAATCGACAATTGAAGGCAATGTTCCATTCAGAGCTGGTAAGCAGCATAATTCTATTGAAGAGGCAGATGTAGACGTTTATGGAAGTCCTACTATCGAAGTGGAGGCTAAAGTAGATCATAGAACTAAAAACTACAAGGCTGGTAGTAGAGATATGGATCATCAAGAAAAAGTTTTGAAGAAACCAGACAAGGTTCTCCCTTGTCCTCGCTGCAACAGCTTGGAGACTAAGTTTTGCTATTTCAACAATTACAATGTTAATCAACCTAGGCATTTCTGCAAAAATTGCCAAAGATATTGGACAGCTGGGGGGATAATTAGAAATGTTCCTGTGGGTGCTGGAAAGCGCAAAAATAAACATTCGCCATTACCTGTTGGCCCAGATTCAGCATCTGTTGCCCACACGGACTCCAACTCGCCCCCTACAGTTTCAAGACCTACTGGAGGAATGGGAAATAGCCCAGGAATTGGGGAGGATGCTCCTCTTTGTGAATCCTTGGAGGCTGTGTTAAATCTAAAAGGCCAGAAGAAAACTGAAGTTGACTCTTCTATTGGTGATGATGGTGAGGAGGCTTCCAAGGATTTTGAATCTAGGGAAAAGGAATGCTCGGCAAATGAAATTGAGCAGGTAGGTTTGCAACAAGAAGTAAATGGTTTTAATCCTCTACATCCACTTCATTACTATCCTGTACCTCCCTGGGCTTACCAATGGAGTCCATGTTGGAATTCAATGGTATTTAGACCTGGTCCTGCTTACATGGGCTCTGCATCCATGATGGCAGTCCCAGGTTTCACTGCACCAACAATGGAATTCTCACCAGGACCTTTCTATTCAAGTCCCCTACCAAGCTGGACTGGCCAGAAGGAAGAGTCTCCATTTGCTGGGTCTACATTTAGTGGCATCCCATCACCTTCCTCTTCCACTAGCAGCAGTGTTTGTTCGGGGACTAAGTCTCCAACCTTAGGAAAACATTCCAGAGATGTAAGTACTCAGACAGGTGATGCAATGAGACGGAATCTTTGGGTACCTAAGACTCTGAGAATTAATGATCCAGAAGAAGCTGCAAGGAGTTCTATATGGTCTGCTTTTGGTACAAAGAGAGAACAGAACAAACCTATTATCAAAGGCAGCGTTTTTAAGTCTTTTGAACCTAAGTCGGAAGGTGCAAGTTCTCAG 1278 0.4351 MSTARDPAIKLFGRDIPVDSTRNTDSPQVMNRYDKSTIEGNVPFRAGKQHNSIEEADVDVYGSPTIEVEAKVDHRTKNYKAGSRDMDHQEKVLKKPDKVLPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGIIRNVPVGAGKRKNKHSPLPVGPDSASVAHTDSNSPPTVSRPTGGMGNSPGIGEDAPLCESLEAVLNLKGQKKTEVDSSIGDDGEEASKDFESREKECSANEIEQVGLQQEVNGFNPLHPLHYYPVPPWAYQWSPCWNSMVFRPGPAYMGSASMMAVPGFTAPTMEFSPGPFYSSPLPSWTGQKEESPFAGSTFSGIPSPSSSTSSSVCSGTKSPTLGKHSRDVSTQTGDAMRRNLWVPKTLRINDPEEAARSSIWSAFGTKREQNKPIIKGSVFKSFEPKSEGASSQ 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral814g00004 426 MobiDBLite consensus disorder prediction 316 370 - -
Pral814g00004 426 MobiDBLite consensus disorder prediction 208 229 - -
Pral814g00004 426 Pfam Dof domain, zinc finger 97 154 IPR003851 GO:0003677|GO:0006355
Pral814g00004 426 MobiDBLite consensus disorder prediction 165 183 - -
Pral814g00004 426 ProSiteProfiles Zinc finger Dof-type profile. 100 154 IPR003851 GO:0003677|GO:0006355
Pral814g00004 426 MobiDBLite consensus disorder prediction 213 229 - -
Pral814g00004 426 ProSitePatterns Zinc finger Dof-type signature. 102 138 IPR003851 GO:0003677|GO:0006355
Pral814g00004 426 PANTHER CYCLIC DOF FACTOR 2 4 422 IPR045174 GO:0003700|GO:0006355
Pral814g00004 426 MobiDBLite consensus disorder prediction 146 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral814g00004 Pral-Chr814 64323 66761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral814g00004 6 404 C2C2-Dof Transcription Factor Family AT5G39660 33.547 4.37e-63 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral814g00004 zf-Dof 9.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral814g00004 - - ccaj:109811729 413.69