Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5934g00004 ATGTTGTCTTTTTGGGATTTTTCTTTTGATGCAGGTCAAAAGAACCAATTGATTGCAAATGTGAGTCATGATTCATCTCTATCTGACACTGCTACCAATGATAAACTCCTCAGTGAGCTTCTAGCTCCCACTTTTGATGAAGGATCATGCCTAAGTAGGTATCAATCTTATTTATATCGCAAGGCATCCCCTCATAAACCCTCATCATATCTGATACTCAAGCTACGCAACTATGAACACCTTCATAGAAGATGTGGACCCCTCACCAACTCCTTTGACAAAGTCATGAAAATGGGCAAAACATCTGGCAAAAACGTTGCAGCTACAAAGTGCAAATACCTTGTTTGGACAGCTGCTAATGGCTTGGGGAATAGGATGATAACCTTGGCTGCGGCATTTCTTTACGCCATAATCACAGATCGAGTTCTACTTGTTAGATTTGGGTCTGATATGGTTGGTCTCTTCTGTGAGCCATTTCCCAATTCATCATGGTTATTGCCTCAGAATTTTCCTTATCGCAGAGAACAGAAACATATTGAAACCTATGAAAGTTTACTAAACAAGACACGTGATTCGAATGTGATTTGGCCATCATTTCTAACTCTTAATCTACAACACACCCATGATGGTCACAATAACTTTTTTCATTGTGATCATAGCCAAAGTCTTCTCCAGAAAGTTCCTGTATTGATTTTGAAGTCAGATCAATATTTTTCCCCTTCTCTTTTCATGATTCCATCTTTTGGGCAAGAGCTAAGCAAAATGTTCCCAGAAAAAGACACTGTTTTCCACCATCTGGGACGCTACCTTTTTCACCCATCAAATGAGGTGTGGGATGTTATTAGCAGGTTCTATAAAGCTCACTTGGCCAAGGAAAATGAGAGGATTGGCCTCCAAATAAGAATCTATAATACTCATCGAGCTCCACATCAAACCATCGTTGATGAAATATTAACTTGTGCCTTCAAGCATAGCCTGCTGCCTCAATTGGGCCATCACAAGTCAGTAACATCTCCATCGAAGAACAATCCTTCAAAAGCCATCCTAGTTGCATCTTTATACTCAGAATACGGTGAGAAGCTAAGGGCTATGTATTTGGGCAACACAACTGTGACTGGGGAAGTTGTCAGAGTTTATCAGCCAAGTCATGAAGGGCATCAAAAGTCGAATGATAATGGGCATAACATCAAGGCATGGACTGAAATATATTTGCTGAGTTTGTGTGATGCTTTAATCACCAGCCCCAAGTCTACTTTTGGGTATGTTGCTCAAGGACTTGGGGGTTTGAAGCCATGGATTCTGCAGAGAGCGTATGGTGAACACATCCCTGATCCACCATGTCTACAAGCTGTATCCATGGAACCTTGTTTTCATTATCCACCTAAACATGATTGTAAGGCCAGTAGAATAGTGAAATTTACTTCCCGTTTTCCGCATATTACGAAATGTGAAGATGTAAGTAATGGATTGAAGCTGGTTGATGTTCATCGCTCAGTGACAAATTCGTGA 1509 0.4062 MLSFWDFSFDAGQKNQLIANVSHDSSLSDTATNDKLLSELLAPTFDEGSCLSRYQSYLYRKASPHKPSSYLILKLRNYEHLHRRCGPLTNSFDKVMKMGKTSGKNVAATKCKYLVWTAANGLGNRMITLAAAFLYAIITDRVLLVRFGSDMVGLFCEPFPNSSWLLPQNFPYRREQKHIETYESLLNKTRDSNVIWPSFLTLNLQHTHDGHNNFFHCDHSQSLLQKVPVLILKSDQYFSPSLFMIPSFGQELSKMFPEKDTVFHHLGRYLFHPSNEVWDVISRFYKAHLAKENERIGLQIRIYNTHRAPHQTIVDEILTCAFKHSLLPQLGHHKSVTSPSKNNPSKAILVASLYSEYGEKLRAMYLGNTTVTGEVVRVYQPSHEGHQKSNDNGHNIKAWTEIYLLSLCDALITSPKSTFGYVAQGLGGLKPWILQRAYGEHIPDPPCLQAVSMEPCFHYPPKHDCKASRIVKFTSRFPHITKCEDVSNGLKLVDVHRSVTNS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5934g00004 502 Gene3D - 275 432 - -
Pral5934g00004 502 FunFam Galactoside 2-alpha-L-fucosyltransferase 109 160 - -
Pral5934g00004 502 Gene3D - 108 193 - -
Pral5934g00004 502 PANTHER FUCOSYLTRANSFERASE 2-RELATED 17 494 IPR004938 GO:0008107|GO:0016020|GO:0042546
Pral5934g00004 502 Pfam Xyloglucan fucosyltransferase 28 466 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5934g00004 Pral-Chr5934 22297 27868 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5934g00004 33 493 Xyloglucan Fucosyltransferase1 AT2G03220 50.749 3.10e-163 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5934g00004 K13681 - gmx:100799776 734.947