Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5934g00003 ATGGGGCTTAGTTCCGACAGATACAGAATATCCTTGGTTGTCCTCTGCACAATTTTCCTTATACTATGTGGATTTAGTTATAAATACTCAATTTTTGACCATGTTGGGAGTTTTTCTAAAGATAAGGCATTTGAAGGGAGAGGCCAAAACTTGACACATAAGAATTTGGGATCAATAGTTGAGGCTATTGCAGACTCAGAAGCAGGGAGAGGCCAAAACTTGACACATGGGAACTTGGGATCAACAATTCAGGCTATTGCAAATTCAGAAGCAGTTTCAAGAAATTATTCACTCAAAAACTCAACAGAGGATTCATCCCTACTTACCAGAAAGCCTACTGCTGACAAACTGTTTGATGGGCTTTTAACTTCTGCGTTTGATAAAACATCATGCTTAAGCAGGTTTCAGTCCTACTTATACCATAAGGCTTCGCCTCACAAACCGTCTCCCTATCTAATAACCAAGCTTGGCAAATACGAAGATCTCCATAAAAGGTGTGGACCTCATACTAGACTCTACAACAAAACCATAAAAGAGTTGATAAGGCCTAGGAAAAGGGGACATTCTGCAGTATGTAACTACATTGTGTGGACTTCTGTCAATGGCTTGGGGAATAGAATGGTGAGCATGGCTTCAGCATTCCTATACGCTCTCCTCACAGATCGAGTTCTAATGGTGGATTTTGAGGATGAAATGACTGGCCTATTTTGTGAACCATTTCCTAATTCATCATGGCTTTTGCCAAATGATTTTCCTTTCATAAACAAGCCAAGACATATTGAGACATATCAAAACATGATAAAGAAGGATAGAGAAAACAGTTCAGGGAAGGTTTCTCCTTTGGTTCTACATCTATATCTACAGCATACCAGTGATGATTCTGAGAAGTTCTTTCACTGTGATCATAGTCACCGTCTTCTCAGTAAGGTTCCCCTGTTGATATTAAGATCAGATCAGTATTTTGTACCTTCTCTGTTCATAGTTCCATCTTTCAGTCAAGAATTAAGAAAAATGTTCCCTGAAAAAGACACTGTTTTTCACCACTTGGGACGGTACTTATTTCTACCTTCAAATCAGGTGTGGGGAATAATTAACAGATTCTATCAGGCATACATGGCCAGGGCAGATGAGAGAATTGGTCTCCAAATTAGAGTATATCCTGACCTCTCTACAAATCAAGCAAAAATGGATCAAATATTAAGATGCACCCTAAGGAATAATGTATTGCCTGAACTAGACCTGAGAGATTCAGTAACTTCTCCAAGGAAAAACCAAACAAAATCTGTTCTGGTAACATCTTTGTATTCATATTTTAGCGAGAATTTAACGACTATGTATCTGAAAAAACCAACTGTTACTGGGGACATAATAGGAGTTTATCAGCCAAGTCATGAAAAGAAGCAGAAGTCTCATGACAACATGCACAATGTAAAGGCTTTGACTGAAATATATCTGCTTAGTATGTGTGATGTATTGGTGACTAGCTCTATATCTTCTTTTGGGTATGTGGCTCAAAGTTTGGGAGGCTCGAAGCCATGGATTCTTCACAAGTTATTAGACAATAACGTCCCAGATCCTCCTTGTGTGCGAGACTTCTCCATGGAGCCATGTTTTCATTATCCACCTAAGCATGACTGTACGGCAAAGCCTATGGACGAAAATGGCAAAGCTTTTCCTTATACAAGACCATGTTTGGACCAAAGAATTGGAATGAAGCTGGTTAATGATCGTGAGTAG 1737 0.3915 MGLSSDRYRISLVVLCTIFLILCGFSYKYSIFDHVGSFSKDKAFEGRGQNLTHKNLGSIVEAIADSEAGRGQNLTHGNLGSTIQAIANSEAVSRNYSLKNSTEDSSLLTRKPTADKLFDGLLTSAFDKTSCLSRFQSYLYHKASPHKPSPYLITKLGKYEDLHKRCGPHTRLYNKTIKELIRPRKRGHSAVCNYIVWTSVNGLGNRMVSMASAFLYALLTDRVLMVDFEDEMTGLFCEPFPNSSWLLPNDFPFINKPRHIETYQNMIKKDRENSSGKVSPLVLHLYLQHTSDDSEKFFHCDHSHRLLSKVPLLILRSDQYFVPSLFIVPSFSQELRKMFPEKDTVFHHLGRYLFLPSNQVWGIINRFYQAYMARADERIGLQIRVYPDLSTNQAKMDQILRCTLRNNVLPELDLRDSVTSPRKNQTKSVLVTSLYSYFSENLTTMYLKKPTVTGDIIGVYQPSHEKKQKSHDNMHNVKALTEIYLLSMCDVLVTSSISSFGYVAQSLGGSKPWILHKLLDNNVPDPPCVRDFSMEPCFHYPPKHDCTAKPMDENGKAFPYTRPCLDQRIGMKLVNDRE 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5934g00003 578 Gene3D - 363 516 - -
Pral5934g00003 578 PANTHER FUCOSYLTRANSFERASE 2-RELATED 38 575 IPR004938 GO:0008107|GO:0016020|GO:0042546
Pral5934g00003 578 FunFam Galactoside 2-alpha-L-fucosyltransferase 190 241 - -
Pral5934g00003 578 Gene3D - 190 246 - -
Pral5934g00003 578 Pfam Xyloglucan fucosyltransferase 113 546 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5934g00003 Pral-Chr5934 14831 19649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5934g00003 114 574 Xyloglucan Fucosyltransferase1 AT2G03220 51.805 6.15e-165 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5934g00003 K13681 - qsa:O6P43_033736 602.438