Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5870g00017 ATGTGTTTCGTTGTTCTGATTCTGATGATCTCTGGGACCATCGAGCTCCCTCCATCGATATACTTTTATTCTTTACCTTCATTCAGCATCTTCAATAACGATACTTCAAGCTGGGCTGATATTCATCATGAAGGTCATGGCTTCACCGATCTGCTTGGTGCCTTTAAGGAGTGGGATTCTCAAGTGGGTTGTGATGAGTTTAAGAAGAAACTGCAGAATTATACAGATAATGCTTCTTCTTCTTCTTCTTCTTCTTTCAAAGAAGAGATTCATGGGGTGTGTGAGGGTTTAAAGATGAAGCATGTGAATGTTTTGGTGAAAGGGCCAACGTGGATTCCTGATAATTTGGATAACTTGTACTCTTGTCCGTGTGGTTTGAGCTGCTTGTGGACTAAATCTCCTGTTCTTGCTGATAAACCTGATGCTCTCTTGTTTGAAAGCACTAAGCCTCCACTTCGGAGGAAGGTTGGAGAACCAGTAAGGGTATATATGGATCTGGAACCAGACAGAAAAAGAACAGGCCGTGAGGACATATTCATCAGTTATCATGCTGATGATGATATCCAGACAACCTATGCCGGTGCCTTCTTCCACAACAACCGAAACTACCACGTTTCCTCTCACAAGAACACTGGCCCATTAGTGTACTGGTCATCGTCCCACTGTGTATCCAAAAGAAACAAGATAGCTCAAAAGCTTCTCTCAATGTTGCCTCACCATTCCTTTGGCAAGTGCCTCAACAACGTTAATGGCAGAAACAAGGCTCTCTCCTTCTACCCTCACTGTACCCAATCTTCTTCCCCAAGATGGTGGGACCACCTTCACTGTGCCATGTCCCACTACAAGTTCGTCCTCGCCATAGAAAACACCTGGACGCAAAGCTACGTCACAGAGAAGCTCTTCTACGCCTTGGATTCCGCCGCCGTCCCCATCTACTTCGGAGCTCCGAACGTCGACGACTTTGTGCCGCCACATTCCGTCATCGACGGCTCCACGTTCAGCAGCCTGGAAGATTTGGCTTTGTACGTTAAGGCTTTGGCTAATGATTCAGTGGCTTATGCAGAATATCATGCTTGGAGAAGATGTGGTGTGCTGGGCAATTATGGAAGAACCAGAGGACTTAGCCTCGACTCTTTGCCTTGTAGGCTGTGTGAACTTGTTAGCAGAAAAGGGGGAAGAAATGCAGAGTCCAATTCATGA 1200 0.4592 MCFVVLILMISGTIELPPSIYFYSLPSFSIFNNDTSSWADIHHEGHGFTDLLGAFKEWDSQVGCDEFKKKLQNYTDNASSSSSSSFKEEIHGVCEGLKMKHVNVLVKGPTWIPDNLDNLYSCPCGLSCLWTKSPVLADKPDALLFESTKPPLRRKVGEPVRVYMDLEPDRKRTGREDIFISYHADDDIQTTYAGAFFHNNRNYHVSSHKNTGPLVYWSSSHCVSKRNKIAQKLLSMLPHHSFGKCLNNVNGRNKALSFYPHCTQSSSPRWWDHLHCAMSHYKFVLAIENTWTQSYVTEKLFYALDSAAVPIYFGAPNVDDFVPPHSVIDGSTFSSLEDLALYVKALANDSVAYAEYHAWRRCGVLGNYGRTRGLSLDSLPCRLCELVSRKGGRNAESNS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5870g00017 399 PIRSF FucT_plant 1 398 IPR017177 -
Pral5870g00017 399 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 84 389 IPR001503 GO:0006486|GO:0008417|GO:0016020
Pral5870g00017 399 FunFam Alpha-(1,4)-fucosyltransferase 161 365 - -
Pral5870g00017 399 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 214 391 IPR001503 GO:0006486|GO:0008417|GO:0016020
Pral5870g00017 399 Gene3D - 163 364 IPR038577 -
Pral5870g00017 399 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 91 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5870g00017 Pral-Chr5870 140301 142347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5870g00017 1 395 Xyloglucan Fucosyltransferase1 AT1G71990 61.654 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5870g00017 K14412 - ming:122090638 555.058