Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5788g00003 ATGGGTCTATTGTCAAATCATAGAGGCTCAAGAACAGAGACAAACCAGGAAACTTTACCGGTTTCCACAGCTGGTTTATCGGTGCCGCCCAAGAAGAGATGGTCCAATCTAATGCCGCTGTTCGTGGCCCTTGTGGTCATAGCAGAGATCGCCTTCTTGGGTAAGTTGGATGTGGCGAAGAACACAGTTATGGTCGATACGTGGGCGGACTTAATTTACTGGTCTCCTGAAGTCGTACCAAAAGATGATTTGGGAATAGCTCATGAAGTCGTACCAAAAGATGATTTGGGAATAGCTCATGAAGTCGTACCAAAAGATGATCTGGGGGTAGATATGCTGGGTAGGGGTCGGAGTTCAGAATCTGAGAGCTGTGAGGAGTGGTTAGAGAGGGAGGATGCTGTGACGTATTCAAGGAACTTCACAAAGGAACCTATTTTGGTTAATGGAGCTGAGCAGGAGTGGAAATCTTGTGCCGTTGGATGCAACTTTGGTTATAATTCAGGTATCAAACCTGATGCAGCATTTGGCATACCTCAGCAAGGTGGAACGGCTAGTGTTCTGCGATCTATGGAATCTTCGCAATACTATGCAGAGAACAATGCAATGGCAAGACGGAGGGGATATCACATTGTAATGACAACCAGTCTATCATCTGATGTTCCTGTTGGATATTTCTCTTGGGCTGAGTATGACATTATGGGACCTGTACAACCGAAAACTGAAAGTGCCCTTGCAGCTGCTTTCATTTCCAATTGTGGTGCTCGAAATTTCCGGTTGCAAGCTCTTGAGGGTCTTGAAAAAGCAAACATCAAGATTGATTCTTATGGTGGTTGCCATAGAAACCGTGATGGAAGAGTGGACAAAGTGGAAACCCTGAAGCACTACAAATTTAGCTTGGCATTTGAGAATTCAAATGAGGAGGATTATGTAACTGAAAAATTCTTCCAATCTCTTGTTGCTGGTTCTGTTCCTGTTGTGGTTGGCGCTCCAAATATTCAGGATTTCGCCCCAGCCCCTGGTTCAATTTTACATATTAGAGAGCTAGAAGATGTTGAATCAGTCGCCAAAGCCATGAAACACCTGGCAGAGAACCCCGAGGCATATAACCGTTCACTGAGATGGAAGTATGAGGGCCCATCTGATTCTTTCAAGGCCCTTGTGGACATGGCGGCAGTACATTCATCTTGCCGCCTTTGCATTCACTTGGCCACAACGATTAGAGAGAAGGAAGAAAAGAGCCCAGGCTTCAAGAAGCGCCCCTGCAAGTGCAATAGAGGTTCAGAAACTGTATATCACATATATGTGAGAGAAAGGGGACGGTTTGAGGCGGAGTCCATTTACTTGAGGTCAAGCAATCTGACTCTGGAAGCTTTGAAGTCTGCTGTGTTAAAGAAGTTCACATCCCTGAATCATGTACCCATATGGAAGACAGAAAGACCAGAAAGCATAAGAGGAGGAAATGAGTTAAAAATTTACAGAATATATCCTGTAGGGTTGACACAGAGGCAGGCTTTATATACCTTCAGCTTCAGAGGAAATGCTGATTTTAGAAACCACTTGGAAAGCAATCCATGTTCCAAGTTTGAAGTCATATTTGTGTAG 1602 0.4451 MGLLSNHRGSRTETNQETLPVSTAGLSVPPKKRWSNLMPLFVALVVIAEIAFLGKLDVAKNTVMVDTWADLIYWSPEVVPKDDLGIAHEVVPKDDLGIAHEVVPKDDLGVDMLGRGRSSESESCEEWLEREDAVTYSRNFTKEPILVNGAEQEWKSCAVGCNFGYNSGIKPDAAFGIPQQGGTASVLRSMESSQYYAENNXAMARRRGYHIVMTTSLSSDVPVGYFSWAEYDIMGPVQPKTESALAAAFISNCGARNFRLQALEGLEKANIKIDSYGGCHRNRDGRVDKVETLKHYKFSLAFENSNEEDYVTEKFFQSLVAGSVPVVVGAPNIQDFAPAPGSILHIRELEDVESVAKAMKHLAENPEAYNRSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATTIREKEEKSPGFKKRPCKCNRGSETVYHIYVRERGRFEAESIYLRSSNLTLEALKSAVLKKFTSLNHVPIWKTERPESIRGGNELKIYRIYPVGLTQRQALYTFSFRGNADFRNHLESNPCSKFEVIFV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5788g00003 534 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 130 410 - -
Pral5788g00003 534 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 191 383 - -
Pral5788g00003 534 MobiDBLite consensus disorder prediction 7 23 - -
Pral5788g00003 534 Gene3D - 189 383 IPR038577 -
Pral5788g00003 534 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 130 484 IPR001503 GO:0006486|GO:0008417|GO:0016020
Pral5788g00003 534 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 243 408 IPR001503 GO:0006486|GO:0008417|GO:0016020
Pral5788g00003 534 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5788g00003 Pral-Chr5788 12091 17708 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5788g00003 1 534 Xyloglucan Fucosyltransferase1 AT1G49710 63.401 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5788g00003 K00753 - gmx:100776065 820.461