Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5515g00019 ATGGGTTCCGGTGGGATGACGACAATGGAGCAACCTTCAGGTCAGGAGCTTCAGCAGCAGCAACAATCTCTCAATTGTCCTCGTTGTGATTCAACCAACACTAAGTTCTGCTACTACAACAACTACAGCTTGTCTCAGCCAAGGCACTTCTGCAAATCTTGCAAGCGATATTGGACCAGAGGAGGCACTCTGAGAAATGTTCCTGTAGGAGGTGGGTGCAGGAAGAACAAGCGCGTGAAGCGCCAAACACCTTCTGCTTCTGATCAAACTCCTTCTTCTTCGTCTTCTTCTTCTCCTACTGCTGCTAATTCAAACCCTCCTTCTCAACCCCACATCGATAATCATGTCAATCCTCTGTTTTATGGGTTGCCTCGTAACTCTAATTCTGATATGAATCTTCCATTTCCAAGGTTCAATTCTGGGTACGATCATCTTCAGCCTCATCTGAATGCCCTGGGATTGGGATTTTCCTCTGCGTACACTTTAAACGATTCACTTTTTTCGAATTACAATTCCGTCTTTGGTAATTCGATCTTCGGTAGTTCTTCAACTGCCATATCCTCCCTCCTAAGCCCTAGTACTAATCTGCAGCAACAGAAGTTCATCAATGGAGGTGTGAAGGATGATGTTCTAGGCACCTGCACTTTCCAGGGCTTAGACCCACTAGAAGAGGTGAAAGTCGAAGAAGAAAGACCCAACCAGATCACTGAGCATGGGAGCTTGTTCGATTACTACTCACCTTATTATTGGAATGATCAGACAAATAATGTTGGTCCTTCAGTCGCTTCTATGATCGAGTAA 801 0.4507 MGSGGMTTMEQPSGQELQQQQQSLNCPRCDSTNTKFCYYNNYSLSQPRHFCKSCKRYWTRGGTLRNVPVGGGCRKNKRVKRQTPSASDQTPSSSSSSSPTAANSNPPSQPHIDNHVNPLFYGLPRNSNSDMNLPFPRFNSGYDHLQPHLNALGLGFSSAYTLNDSLFSNYNSVFGNSIFGSSSTAISSLLSPSTNLQQQKFINGGVKDDVLGTCTFQGLDPLEEVKVEEERPNQITEHGSLFDYYSPYYWNDQTNNVGPSVASMIE 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5515g00019 266 MobiDBLite consensus disorder prediction 83 112 - -
Pral5515g00019 266 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 172 IPR045174 GO:0003700|GO:0006355
Pral5515g00019 266 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
Pral5515g00019 266 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Pral5515g00019 266 MobiDBLite consensus disorder prediction 68 120 - -
Pral5515g00019 266 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5515g00019 Pral-Chr5515 52604 55570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5515g00019 24 241 C2C2-Dof Transcription Factor Family AT1G28310 43.210 1.54e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral5515g00019 zf-Dof 2.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5515g00019 - - pcin:129304804 444.121