LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5450g00074	ATGGTTGAGCTCCTGGAAGAGAATGACTCGTTCTCTAGTCGTGCAGAAACTGAAGAGGAAGTCGAAGCCGAAGAAGATATCGACTATGAGCAGCTCAAGAAGCGCATGTGGAAGGACCGGATGCTTCTACAGAAGCTCAAGGATAAACGTCTCAGAGATGAACCCGACCAGAACGCAAAACAAGAAGCATCCAGACGGAAGAAGCTGGCGAGAGCACAAGATTCGATCCTCAAATACATGGCGAAGATCATGGAAGTCTGCAACGGTCAAGGTTTTGTTTACGGGATTGTCCCCCAGAAGGGAAAGCCGGTCACCGGTTCCTCGGACAGCCTTAGGGAGTGGTGGAAAGAACAAGTGCGCTTTGACCAAAATGCCCCTCTTGCCATTGCTAAGCACTTGCCCCTGGTTGAAAAGGCTCAGGCGGACCCGGCCTCCTGCATGCACCTGCTTCACGAATTGCAGGATACTACGTTGGGCTCTCTGCTTTCTGCTCTCATGCAGCACTGTGCACCTCCTCAGAGGAAATTTCCTCTGGAGAGAGGCCTGGCTCCTCCGTGGTGGCCCAGCGGTAACGAAATTTGGTGGGGCGAGCAAGGAGTGATGGCCCAGGAACATGGTCCTCCGCCTTATAAGAAGCCCCACGATCTGAAAAAGGCCTGGAAAGTCTCTGTCTTGGCCGCAGTCATAAAGCACATGTCTCCTGATTTGAACAGACTGAGGAAGCTGGTGACACAATCCAAGTCTTTACAAGATAAGATGACGGCCAGAGATACTGCGACCTGGTCCAAAGTCGTCAGTCAAGAGGAAGCACTGCTAGCTCTGACAAAGAAGTGCCTCAGAATATCACTGTCCGAAGAACACGAAGAAGAAGAAGAAGAAGGAGAAAAGGAAGGGAGTGAAGGCTTAATTGTTCATGCTTTGAACAGTGGTAATTTTTGGCAGAAGAGTCGATATGCATTTGATCGAGAAGCTTCTCAAAATGCAGAGAGTTCCCATGCGAGTGAATTAAGTGCGGGATTCCCAGGCGGTGCTGCCTGGGCTTTCCGGCAGGTTGCCTTGTGTGATTATCTGTCGAGTGATGCACAAATGGCAAGCGTTGCAGATTGGATGAACAAGGAGCTAGAAAAAGCTAATGAGATGAATTATTTGAATGCAGAGGGAGATTATGGAGGCTATTGGCTAGATGGGATTGACAGCATGGAACTGCGTTCTGCACTTGAGATGGTACGAGATGATCGCGACCTCTGGAATCAATTTCCAGACCAACACAATTCTGATGCCCAACAACATACATCCATCTGGGATTTGGCCTATCAAGAAACTGATGATTAA	1332	0.4925	MVELLEENDSFSSRAETEEEVEAEEDIDYEQLKKRMWKDRMLLQKLKDKRLRDEPDQNAKQEASRRKKLARAQDSILKYMAKIMEVCNGQGFVYGIVPQKGKPVTGSSDSLREWWKEQVRFDQNAPLAIAKHLPLVEKAQADPASCMHLLHELQDTTLGSLLSALMQHCAPPQRKFPLERGLAPPWWPSGNEIWWGEQGVMAQEHGPPPYKKPHDLKKAWKVSVLAAVIKHMSPDLNRLRKLVTQSKSLQDKMTARDTATWSKVVSQEEALLALTKKCLRISLSEEHEEEEEEGEKEGSEGLIVHALNSGNFWQKSRYAFDREASQNAESSHASELSAGFPGGAAWAFRQVALCDYLSSDAQMASVADWMNKELEKANEMNYLNAEGDYGGYWLDGIDSMELRSALEMVRDDRDLWNQFPDQHNSDAQQHTSIWDLAYQETDD	443

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5450g00074	443	PANTHER	ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN	12	295	IPR006957	GO:0003700\|GO:0005634
	Pral5450g00074	443	Pfam	Ethylene insensitive 3	30	269	IPR047091	GO:0003700
	Pral5450g00074	443	FunFam	Ethylene insensitive 3-like 1	141	278	-	-
	Pral5450g00074	443	SUPERFAMILY	DNA-binding domain of EIN3-like	147	272	IPR023278	GO:0003700\|GO:0005634
	Pral5450g00074	443	Gene3D	-	140	278	IPR023278	GO:0003700\|GO:0005634
	Pral5450g00074	443	Gene3D	-	58	139	IPR023278	GO:0003700\|GO:0005634
	Pral5450g00074	443	MobiDBLite	consensus disorder prediction	1	25	-	-
	Pral5450g00074	443	MobiDBLite	consensus disorder prediction	48	67	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5450g00074	Pral-Chr5450	345950	347281	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5450g00074	24	302	EIL Transcription Factor Family	AT5G10120	60.959	1.19e-121	360

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	EIL	Pral5450g00074		EIN3	3.3e-113	No_clan