Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4873g00020 ATGGAAGGAATACCTAATCAAAACTCAGTGACAAAGCCAGTAATGATAGAGAAGAAGGCAAGGCCACAAGAACAATTGAACTGTCCGAGGTGCAATTCCACCAACACCAAGTTCTGCTATTACAACAACTATAGCCTCACACAGCCCAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACAGAAGGTGGGTCCCTCAGAAACATCCCAGTTGGAGGAGGTTCTAGAAAGAACAAGAACAAGATCATCACTTCCTCTTCCTCTTCTTCATCAACCTCATCATCGTCAAAGGTTCCTGATCTAAATCCACCATTACCGAGTCTCTCAGGGTTGAAAGATCCAAGTTTGAACCTCTCTCGAAGCCAGATGATGAACCAAGGCTTCCCAACGAATTGTACCATTTCCAACCAGCAAAGTCCTAAGATCCATGGAGGCCAGGATCTTAATCTGGCTTTTCCTGCTTCTTCTCTTTCAGCTCCTAGGGTTTTGAATAGTAATAATATTCCTTATGTTCCTTCATTCATGATGCCCAATAGCTCGTATGGTAACCTTAATTACCCATCTGGGTTAATTCCCATGCAAGAAGAAACTAAGCCGAGCCAGCTGGGATTTTCTGTGGATGGGCTTGGAAATAGATCATACGGAGTACAAGAGAATGACCATAACGGCGGGAGGCTTTTGCTTCCTTTCGGAGGAGTCAAGCAGATTCCGGGTGGCGATGAAGTGGAGCAAAGCAGTAAAGACCAAGGGAATTCAACTGGGTTTTGGACTGGAATGATTGGTGAAGGATCATGGTAA 798 0.4461 MEGIPNQNSVTKPVMIEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKNKIITSSSSSSSTSSSSKVPDLNPPLPSLSGLKDPSLNLSRSQMMNQGFPTNCTISNQQSPKIHGGQDLNLAFPASSLSAPRVLNSNNIPYVPSFMMPNSSYGNLNYPSGLIPMQEETKPSQLGFSVDGLGNRSYGVQENDHNGGRLLLPFGGVKQIPGGDEVEQSSKDQGNSTGFWTGMIGEGSW 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4873g00020 265 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 178 IPR045174 GO:0003700|GO:0006355
Pral4873g00020 265 MobiDBLite consensus disorder prediction 78 102 - -
Pral4873g00020 265 Pfam Dof domain, zinc finger 24 80 IPR003851 GO:0003677|GO:0006355
Pral4873g00020 265 ProSitePatterns Zinc finger Dof-type signature. 28 64 IPR003851 GO:0003677|GO:0006355
Pral4873g00020 265 MobiDBLite consensus disorder prediction 67 122 - -
Pral4873g00020 265 ProSiteProfiles Zinc finger Dof-type profile. 26 80 IPR003851 GO:0003677|GO:0006355
Pral4873g00020 265 MobiDBLite consensus disorder prediction 238 265 - -
Pral4873g00020 265 MobiDBLite consensus disorder prediction 242 259 - -
Pral4873g00020 265 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4873g00020 Pral-Chr4873 124855 127161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4873g00020 14 265 C2C2-Dof Transcription Factor Family AT3G61850 42.960 5.77e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral4873g00020 zf-Dof 6.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4873g00020 - - gmx:778110 267.314