Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4834g00063 ATGAATATTCCAGAACGGGGCGGTGGTGGTGGTGACGGTGGAGGAGGAGGAGGAGGAGAGGTGAATAACCAACCTCAGCAGCCGCCGCAGCCTCCGCCACAGCAGAGATGTCCTCGCTGTGATTCTGTGAACACCAAGTTCTGCTACTACAACAACTACAGCCTTTCGCAGCCAAGGTACTTCTGCAAAACTTGTAAAAGGTACTGGACCCATGGAGGATCCTTGCGAAACATACCCATCGGTGGTGGTTGCCGGAAGGGAAAACGGACCAAATCGTTGTCGGCCTCTTCGTCATCATCCGCTGCCGCCCTTCAATTGATGAGCCGGCAACAACCGCTGCAACCTCGGCTGCAAGAGGTGATCCCTACGCAACCGAACCCGATGACGTTACCTTCACGCGTTAATCTGGTCGGTCGTTCTTCTGCGATGGCGGCACCGGCACCGGCACCGGCAGTTCCTTCGATTAGTTCCTACTATCAAGGTGGCGGGCATCTATCATCTCTGGCGGCGATTCACTCCCAAAACCCATCACAACCATTATTCAACCTTTCGTCTCTGAATCTTGTTCCTTCTAATCTGGGTCTTCATCCTTGGTTCAACGCTCCGTCGACTCAAGCCTCGAAGCACCAAGTTCCTCCGTCGTCACCGGTGTTCCAATCGGAAAAAAGAAGCAGGGAGGTGGAATCTCTGTACTTATCTGATCATCGAGGTCTGGTTCATCAAACGAGCATGATGAATATGGGTAATAATAGCAGTTACGCTTCACTCCATGATTGGTCTCAAAACTCTATGTGGAGTACTGTGAGCACAACTTCGATTGCAGACAATTCTGGGAGTACTGGTAATAATGGTCATAGTAATAAGCATGATGCTAATAAAGCTGGATCATCTTCTCTGAGTGGAAATCAATGGCCTGACCTACCAGGATATGACCCTCCTCAATGA 945 0.5058 MNIPERGGGGGDGGGGGGGEVNNQPQQPPQPPPQQRCPRCDSVNTKFCYYNNYSLSQPRYFCKTCKRYWTHGGSLRNIPIGGGCRKGKRTKSLSASSSSSAAALQLMSRQQPLQPRLQEVIPTQPNPMTLPSRVNLVGRSSAMAAPAPAPAVPSISSYYQGGGHLSSLAAIHSQNPSQPLFNLSSLNLVPSNLGLHPWFNAPSTQASKHQVPPSSPVFQSEKRSREVESLYLSDHRGLVHQTSMMNMGNNSSYASLHDWSQNSMWSTVSTTSIADNSGSTGNNGHSNKHDANKAGSSSLSGNQWPDLPGYDPPQ 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4834g00063 314 ProSitePatterns Zinc finger Dof-type signature. 37 73 IPR003851 GO:0003677|GO:0006355
Pral4834g00063 314 MobiDBLite consensus disorder prediction 275 304 - -
Pral4834g00063 314 MobiDBLite consensus disorder prediction 203 220 - -
Pral4834g00063 314 MobiDBLite consensus disorder prediction 275 314 - -
Pral4834g00063 314 ProSiteProfiles Zinc finger Dof-type profile. 35 89 IPR003851 GO:0003677|GO:0006355
Pral4834g00063 314 MobiDBLite consensus disorder prediction 1 38 - -
Pral4834g00063 314 MobiDBLite consensus disorder prediction 90 106 - -
Pral4834g00063 314 MobiDBLite consensus disorder prediction 203 223 - -
Pral4834g00063 314 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 24 259 IPR045174 GO:0003700|GO:0006355
Pral4834g00063 314 Pfam Dof domain, zinc finger 34 89 IPR003851 GO:0003677|GO:0006355
Pral4834g00063 314 MobiDBLite consensus disorder prediction 86 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4834g00063 Pral-Chr4834 701343 702287 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4834g00063 22 188 C2C2-Dof Transcription Factor Family AT4G21050 43.713 1.86e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral4834g00063 zf-Dof 6.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4834g00063 - - pcin:129284817 342.428