Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4834g00062 ATGGCTTCCTCTTCTTCTTCCTCAGCTGCTAATTCTCATCATCAAAGGGTTATGGAAAAGCCAAACCAAGAACTTCTTCAACAGCAACAAGAAGCTCTCAAGTGTCCTCGATGTGACTCATCAAACACCAAGTTCTGTTACTATAACAATTACAGCTTGTCTCAGCCTAGACATTTCTGTAAAGCCTGCAAGCGATACTGGACTCGAGGAGGTACCTTAAGGAATGTTCCTGTTGGTGGAGGTTGCAGAAAAAACAAGCGTGTGAAGCGTCCTTCTTGTTCTTCTTCAGCTTCAGAAACTCATCATAATATTAATATTACTACACCTTCTTCTAATTCTTCTTCTTCTTCTTCTTCTACTGTTGCTGGTGTCTCAGCTGTTTCAAACCCTCCTTCACAGTCTCGTCAGATCGATGTGGGTGCTTCCACCTCCAATCACATCAGTCCTTTATTTTATGGCATGAATCTTCCGTTTCCAAGGTTCAATTCCAGTTCTGGGTTTGATCATCATCATCTTCATCTTCATCAACCTCAGATTAATCACCATTCTCTTGGATTAGATTTCTCAGATAATGGTTACCGAAATGGGTTTTCTTCAAATCATACACTTCTTTCAAGTTATACCTCTTCCATCTTTGCTAATTCTTCTTCAACATCCATAACCACATCCAGTACTGCTCCCCCTCCTTCTATTATGGCTTCACTGTTAAGCTCCTCGAATCTGCAGCAACAAAAGTTCATCAATAGTGGGGCTGATAACAGTACTTTTCAGGGGTTCGGACGATTAGAAGAACTGGCAATAGCAGGCAATAATGATAATAATAGCACAAATACAGCTTTAAAAGAAGTGAAGTCTGTGGTGGAAGATGAAAACAGGTTTCTGGGGTGGCAAAATAACCAGATCGATCATCAAGCAGGCTTGTCTGATCCTTCATCACTTTACTGGAACGCTGCAACAGCTTTGGGTTCTACTTGGAATGATCAAACCAATATTGGTCCTCAGTCACTTCTCTCATCTGATCTACAATAA 1029 0.4091 MASSSSSSAANSHHQRVMEKPNQELLQQQQEALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPSCSSSASETHHNINITTPSSNSSSSSSSTVAGVSAVSNPPSQSRQIDVGASTSNHISPLFYGMNLPFPRFNSSSGFDHHHLHLHQPQINHHSLGLDFSDNGYRNGFSSNHTLLSSYTSSIFANSSSTSITTSSTAPPPSIMASLLSSSNLQQQKFINSGADNSTFQGFGRLEELAIAGNNDNNSTNTALKEVKSVVEDENRFLGWQNNQIDHQAGLSDPSSLYWNAATALGSTWNDQTNIGPQSLLSSDLQ 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4834g00062 342 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 18 246 IPR045174 GO:0003700|GO:0006355
Pral4834g00062 342 MobiDBLite consensus disorder prediction 91 139 - -
Pral4834g00062 342 Pfam Dof domain, zinc finger 31 87 IPR003851 GO:0003677|GO:0006355
Pral4834g00062 342 ProSitePatterns Zinc finger Dof-type signature. 35 71 IPR003851 GO:0003677|GO:0006355
Pral4834g00062 342 ProSiteProfiles Zinc finger Dof-type profile. 33 87 IPR003851 GO:0003677|GO:0006355
Pral4834g00062 342 MobiDBLite consensus disorder prediction 77 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4834g00062 Pral-Chr4834 686920 688817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4834g00062 33 330 C2C2-Dof Transcription Factor Family AT1G28310 36.391 5.27e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral4834g00062 zf-Dof 1.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4834g00062 - - pcin:129285070 395.971