Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00100 ATGCTTATACTCGCAGATTGTTCATTCTGTTATCCTCTTATTTCTAAGAAGAGGAGGAATGAACTTACCTCAGTACAAGAAGATGATGCCTCCTATCAGAGCACAGAGGATTTAAAATCTCCCTCAGCATCTTCAGGCGTCCTTGAGGATCCTAAGACTCCCTCTGCAGAAAGAGAGACTTCTTTACTCAAATCTGCTAAAAATGGAGAACAGAGTGAGACAAGCAATTCAGAAGACAAAACTCCGAAAAAACCTGACAAGATACTTCCATGCCCAAGATGCAATAGCATGGACACCAAATTCTGTTATTTTAACAACTACAATGTCAATCAACCCCGTCATTTCTGTAAGAACTGCCAGAGATACTGGACTGCTGGAGGAACCATGAGAAATGTGCCTGTAGGCGCAGGTCGTCGCAAGAACAAAAACTCTTCAGCCTCACAGTATCGTCAAATAATGGTTCCGAAGACCCTTCAGATTGCCAAAGAAAACTCTACCAATGGATTGCACAATGCTGTTTTAGGAAATAGAGCGGCTGTCTTGACCTTTGGAACAGATTCTCCTCTTTGTGATTCCATGGTTTCTGTGTTAAACCTTGCAGAGAATACACAGAATGGTGTTCTAAATGGGTTTCATTTACCCGAGCAAAATAATTTTGTCTCTTATGGTAGAGAAGATAATGGGAATGATCAATCCGTTGGAGCTTCTGGCACAGCTTCAACTTCTTCAGAGAGGAAAAGCAACACTGCTTCACAAGAACCTGTAAATAACATTAGTCATGGTTTCCCTCCTCAATTGCCTTGCTTCCCAGGTTCCTCGTGGCCTTATCAATGGAACTCAGCGCAGTGGAGTTCTCCTGTCCCTCCTCCCGGATTATGTCCTCAAGGCTATCCGGCATCATTCTATCCCAATCCTATTTATTGGGGTTGTACTTTACCAGCTTCATGGAACATACCTTCCATATCTGCACAATCATCTTCTGTTGGCCAATCAGCCCCTAGCTCTGGCCCTAATTCACCGTCTCTGGGAAAACACTCGAGGGAAGGGAACATTATCAATCAAGTCAACTCACCAAAAGAAAATCCTAATATGGAGAGTGGCAATTCAGAAAGCAGTGTCTTGATTCCAAAGACGTTACGAGTTGATGATCCCAATGAAGCTGCAAAGAGTTCTATATGGTCAGCATTAGGGATGAAGGATGAGAAGGCCACTTCCCTGAATGGAGGAGGCCTTTTCAAGGCATTTCCTGCGAAGAGGGATGTCAAGAACCACGTGGTTGAACCATCACTGGTGTTGCAAGCCAACCCGGCGGCTTTATCACGATCTCTTACCTTCCATGAGCAGACTTAA 1350 0.4393 MLILADCSFCYPLISKKRRNELTSVQEDDASYQSTEDLKSPSASSGVLEDPKTPSAERETSLLKSAKNGEQSETSNSEDKTPKKPDKILPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSASQYRQIMVPKTLQIAKENSTNGLHNAVLGNRAAVLTFGTDSPLCDSMVSVLNLAENTQNGVLNGFHLPEQNNFVSYGREDNGNDQSVGASGTASTSSERKSNTASQEPVNNISHGFPPQLPCFPGSSWPYQWNSAQWSSPVPPPGLCPQGYPASFYPNPIYWGCTLPASWNIPSISAQSSSVGQSAPSSGPNSPSLGKHSREGNIINQVNSPKENPNMESGNSESSVLIPKTLRVDDPNEAAKSSIWSALGMKDEKATSLNGGGLFKAFPAKRDVKNHVVEPSLVLQANPAALSRSLTFHEQT 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00100 449 MobiDBLite consensus disorder prediction 26 49 - -
Pral4667g00100 449 Pfam Dof domain, zinc finger 86 143 IPR003851 GO:0003677|GO:0006355
Pral4667g00100 449 MobiDBLite consensus disorder prediction 219 259 - -
Pral4667g00100 449 MobiDBLite consensus disorder prediction 219 262 - -
Pral4667g00100 449 ProSiteProfiles Zinc finger Dof-type profile. 89 143 IPR003851 GO:0003677|GO:0006355
Pral4667g00100 449 MobiDBLite consensus disorder prediction 21 89 - -
Pral4667g00100 449 MobiDBLite consensus disorder prediction 73 87 - -
Pral4667g00100 449 ProSitePatterns Zinc finger Dof-type signature. 91 127 IPR003851 GO:0003677|GO:0006355
Pral4667g00100 449 MobiDBLite consensus disorder prediction 58 72 - -
Pral4667g00100 449 MobiDBLite consensus disorder prediction 324 371 - -
Pral4667g00100 449 PANTHER CYCLIC DOF FACTOR 2 26 448 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00100 Pral-Chr4667 699321 702396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00100 59 447 C2C2-Dof Transcription Factor Family AT5G39660 43.672 1.21e-86 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral4667g00100 zf-Dof 5.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00100 - - zju:107429011 548.51