Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3968g00035 ATGTTGGGTTGTGATCAATTCTGTGCTGCGTCTGATGCCAGTCCTAAGCCATTCCCCTGGTGGAAGCCCCACCACGTGGAGCCGCCTCCCCCTTGCCCTCGCTGTGCTTCTTCCAATACCAAATTCTGTTACTACAACAACTACAGCTTGTCCCAGCCCAGGTACCTGTGTAAATCTTGCCGTCGCTACTGGACCAAAGGCGGCTTCCTCCGCAACGTCCCCGTCCGCGGTGGTACCCGCAAGTCCCGCCGTACTAAGACCCCCAAGCTCCCGCAAAACCAGCGTCTTTCCGCCAACCATAATCCTCATAACTCCGGCAAAGACTCGGACGCTGACACATCCCGATCCAACGGGTCCGATATTGACATGGCCCTGGTCTTCGCTAATTACTTGACCTCAGGTAATGGTTCCAGTACGGAGAACGATGCGACTCAGGCATCCGATCCGGTCACGGACGTGGTGGTAGAGGGAGAGGGGCCTCTTCCTCCAGACGAGTCGGTGATGAGGGGAATTGAGCTGGAGTGGGAGAGCTTGTTAGGTGGTGGTGACGGAGAAGTGGTCCAAGATGCTTTCTGCTTGTCTGATGCGACCACGTCGTCCTCCTCGTCAGTCACATGGCAACCATCGCTGATGCAGTTCCAAGACGAGTTGGAGAATCCCATCCCCAACTTCAATTATGATGAGGTTGCTCAGTTGCCTATCGCCGATTCCTGGAATTGGAATTCCTTCGATTTTCCTGCTTTGCAGGTCTTCTCATCAAGGCCTCTTGATTCATAA 777 0.5444 MLGCDQFCAASDASPKPFPWWKPHHVEPPPPCPRCASSNTKFCYYNNYSLSQPRYLCKSCRRYWTKGGFLRNVPVRGGTRKSRRTKTPKLPQNQRLSANHNPHNSGKDSDADTSRSNGSDIDMALVFANYLTSGNGSSTENDATQASDPVTDVVVEGEGPLPPDESVMRGIELEWESLLGGGDGEVVQDAFCLSDATTSSSSSVTWQPSLMQFQDELENPIPNFNYDEVAQLPIADSWNWNSFDFPALQVFSSRPLDS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3968g00035 258 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Pral3968g00035 258 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 26 153 IPR045174 GO:0003700|GO:0006355
Pral3968g00035 258 MobiDBLite consensus disorder prediction 89 104 - -
Pral3968g00035 258 Pfam Dof domain, zinc finger 31 84 IPR003851 GO:0003677|GO:0006355
Pral3968g00035 258 MobiDBLite consensus disorder prediction 74 118 - -
Pral3968g00035 258 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3968g00035 Pral-Chr3968 194172 194948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3968g00035 30 151 C2C2-Dof Transcription Factor Family AT1G21340 56.452 1.88e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral3968g00035 zf-Dof 6.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3968g00035 - - pcin:129303730 354.369